Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2426g00002 ATGGCTTCCTCTAATTCATGTCTTCAATCTGCTCCTATTGATTATGAAACTAAACACATCTCCAAATCAGTACCCCAGCAAAATGTCCTAGACATTGAGATCACCACACTTGAAATGGAAGCTATTAGAGCTCCAAAAAAGAATGGAGGAGAAGCTAAGACAGAAGAGGTGGGTATCTTTCTGACATGGAAGGATCTATGGGTGACTACTTCGAAGGGAAAGAATGGAAGCAAAACAATTCTTGAGGGTCTAACTGGTTATGCCAAGCCAGGGCAGCTCTTGGCCATAATGGGTCCTTCTGGTTGTGGCAAGTCTACACTACTTGATACTTTAGCAGGCAGATTAGGTTCAAACACAAGGCAAACGGGGGAGATTCTGATCAATGGTCGCAAACAAGCACTTGCTTATGGAACCTCGGCATATGTCACACAAGATGATACATTATTGACAACCTTAACTGTTAAAGAAGCGGTGCACTATTCAGCTCAACTCCAATTACCTGACTCCATGTCCAAGGCAGAGAAAAAAGAGATAGCAGACTTTACAATAAGAGAAATGGGTTTGCAAGATGCCATTAATACAAGAATTGGAGGGTGGGGTTCTAAAGGCATTAGTGGGGGTCAAAAGAGGAGAGTGGGTATATGCATTGAGATCCTAACACGTCCTAAACTTCTCTTTCTTGATGAACCAACTAGTGGACTCGATAGTGCAGCTTCCTATTATGTCATGAGAAGAATTGCTACCCTGGCTCAAAAAGATGGCATTCAGAGGACTGTTATTGCATCAATTCATCAGCCTAGTAGTGAAGTTTTTCAACTCTTCCATAACCTTTGTCTTCTATCCTCTGGTAGAACTGTTTACTTTGGACCTGCTTCTGCTGCAACTGAGTTTTTCGCTTCAAATGGTTTTCCTTGTCCTGCTCTCCAAAATCCATCTGATCATTTACTGAAAACTATAAACAAGGATTTCGATCAGGACATTGAGGTGGGTTTAGCAGGGACTGGAACAATACCCACAGAAGAAGCAATCCGTATTCTTGTGACATCATATAAATCATCTGAAAGGAACCAAGAAGTTCAAAACGAAGTAGCAGTACTATCTGATAAGGAAACCAGTTCAATTGACAAGAAGAGAGGACATGCAGGCTTCCTTAATCAGTGCTTAGTTCTTATAAAGAGATCGTCTGTGAACATGTTTCGTGATCTAGGCTATTACTGGTTACGCCTAGCCATATATGTTGCATTGGCTTTAAGTTTAGGCACTGTTTTCTATAATTTGGGTACAAGTAATGGCTCAATTAAGGACAGAGGTTCACTTCTTGCATTTGTGTCTGCATTCCTAACTTTTATGACCATCGGTGGATTCCCTTCCTTTGTGGAAGACATGGAGGTATTTCAACGAGAAAGACAAAATGGGCATTATGGTGTCACTGCGTTTGTAATTGGGAACACCTTTTCCTCTGTCCCATTTTTGTTGTTGGTTACACTGATTCCTGGAGTTATAACTTATTTCCTTGCTGGTCTTCAGAAAGGATACGAGCACGTTTTGTACTTCTTGTGTGTTTTATTTTCTAGTTTGATGTTAGTGGAGAGTCTTATGATGATAGTTGCTAGTGTTGTTCCCAACTTTCTAATGGGTATCATAACTGGTGCTGGAATTCAAGGAATCATGCTTTTAATTAGCGGGTTCTTTAAAATGCCACATGAGCTTCCAAGGCCATTTTGGAGATACCCATCACACTATGTTGCCTTCCATACATATGCCTTTCAAGGATTGCTCAAGAACGAGTTTGAAGGACTAAGGTTTGCCACAAATCAAAGCTCACACAATTACATTGGTGGTGAAGAGATTGTAAGAAATACATGGCAAGTTGACTTGAGTATTTCAAAATGGGTTGATCTTGCAATCCTTGTGGGGATGATTGTTCTGTATCGTGTTGTGTTTTTCATTGTCATCAAGACTATTGAGAAGGTGAAGCCTATTGTTGTATCACTATCATGCATGTCAGGGTCTCCCAAGGGAACAATACAGATCCTGGAGACCCCCAATGCCACTCTTTTACATGGAGAGGTTTTATCAATTTGA 2085 0.4072 MASSNSCLQSAPIDYETKHISKSVPQQNVLDIEITTLEMEAIRAPKKNGGEAKTEEVGIFLTWKDLWVTTSKGKNGSKTILEGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILINGRKQALAYGTSAYVTQDDTLLTTLTVKEAVHYSAQLQLPDSMSKAEKKEIADFTIREMGLQDAINTRIGGWGSKGISGGQKRRVGICIEILTRPKLLFLDEPTSGLDSAASYYVMRRIATLAQKDGIQRTVIASIHQPSSEVFQLFHNLCLLSSGRTVYFGPASAATEFFASNGFPCPALQNPSDHLLKTINKDFDQDIEVGLAGTGTIPTEEAIRILVTSYKSSERNQEVQNEVAVLSDKETSSIDKKRGHAGFLNQCLVLIKRSSVNMFRDLGYYWLRLAIYVALALSLGTVFYNLGTSNGSIKDRGSLLAFVSAFLTFMTIGGFPSFVEDMEVFQRERQNGHYGVTAFVIGNTFSSVPFLLLVTLIPGVITYFLAGLQKGYEHVLYFLCVLFSSLMLVESLMMIVASVVPNFLMGIITGAGIQGIMLLISGFFKMPHELPRPFWRYPSHYVAFHTYAFQGLLKNEFEGLRFATNQSSHNYIGGEEIVRNTWQVDLSISKWVDLAILVGMIVLYRVVFFIVIKTIEKVKPIVVSLSCMSGSPKGTIQILETPNATLLHGEVLSI 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2426g00002 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 297 IPR027417 -
Gabi2426g00002 694 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 52 664 - -
Gabi2426g00002 694 SMART AAA_5 90 279 IPR003593 GO:0016887
Gabi2426g00002 694 ProSitePatterns ABC transporters family signature. 204 218 IPR017871 GO:0005524|GO:0016887
Gabi2426g00002 694 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 307 IPR003439 GO:0005524
Gabi2426g00002 694 Pfam ABC-2 type transporter 386 597 IPR013525 GO:0016020|GO:0140359
Gabi2426g00002 694 Pfam ABC-2 type transporter 264 318 IPR043926 GO:0140359
Gabi2426g00002 694 Pfam ABC transporter 83 232 IPR003439 GO:0005524
Gabi2426g00002 694 Gene3D - 61 299 IPR027417 -
Gabi2426g00002 694 FunFam ABC transporter G family member 11 59 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2426g00002 Gabi-Chr2426 12531 20484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2426g00002 80 292 Calmodulin-binding Proteins AT2G36910 27.982 7.61e-10 60.5