Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2425g00001 ATGGATTTCATTTCTAATATTGCTAGGGCCGTTGTTACTAGTGTTGCGACAAGTGGTGCTAAATATTTGGTGGATCCAGCAATTCGTGAGGGACAATACTTCTTTTTTCCAAATAAAGTAATCACAGATCTTGAGAATGAAAAGAAGGAGCTGACATCCGAAAGAGGTAGCATGTTGTTTCGTGTTCAACAAGCCAAAGAGAGAACTGAAGTAATTGAAGAACCTGTGGATAAATGGCTGAAAGATGTGGAAAATATCCTGAAAGAGGTGGAGAAGCTGGAACAAAGGATGGACACAAACAACAATTGCTTTGAAGGATGGTGTCCAACCTGGGGAAGATATCTTTTATGCAAGCAACTGGCGAAAAAGATAGAGGAAATGGGGAAATTCAAAGCCAAAAGCAACATTCAGCCATTTTCTCACCTTGCTCCTCTCCCAGGCATTCAGTACCTGTCATCTGAAAATTTTACTTCCTTTGAATCAACAAAAGTGGCTTACACTCAACTTTGGGAGGCACTCAAGAATGATGGCATCTATATGATAGGAGTGTATGGGACTGGTGGATCTGGGAAAACAACTCTTGTAACTGAAGTGGGTAAGAAAGCTGAGCAGTTGAATTTGTTTGATAAGGTTATATTGGTTACAGTGTCTCAATCTCCCAACATTATAAACATTCAACAAAAAATGGCAGATATGTTATCCTTGAAATTGGAGGAACAAAATGAAGATGCAAGAGCACAACGTTTATGGTTATGTTTGAAACAAAAGAAGCGAATTCTTATAATAATAGATGATTTATGGAAAAAGTTTGAATTGAAGAATATAGGGATTTGCTTGGACAATGATTCAAAGGGAAGATGGAAGGTGCTTCTAACCACTCGTCGTCAAGGTGTATGTAGTTCAATGGATTGCCAAAAAAGTATTTATTTGGATCTCTTATCCAAAGATGATTCTTGGACTTTGTTCCAGAAGCATGCAAACATTGATGATGACTTCTCTAAGTCATTAAATGATGTGCCGCGGGAACTTTGTGATGAATGTAATGGACTACCACTAGTAGCCGTAGCTGTGGGATCTTCCTTAAAAGGAAAATCTAAAGCTGAGTGGGAGATGTCATTAGACAGCTTGAGGCATCCAGACACAATCGATGATCAGGTGGAAGAAGAAGTGAGAGATGCTTTTACTTGTCTTAAGTTAAGCTATGATTATTTAGACGACAAAGCAAAGTTGCTTTTCTTGATATGCTCTATGTTTCCGGAAGACTTTGAAATTGATATAGAAGCTTTGATCCGATATGCAGTTGGACTGGGTTTGGGAGGTCGATTCTCATTAGACTCGGCAAGGAGCTGGATCCGAAGTGGTATAAACAAACTTTCAGATTCTTGTTTGTTGATGCATGTTGAGAAAAGGAAAAACCACGTGAAGATGCATGACATGGTTCGTGATGTAGCCTCATGGATAGCAAAAACATCAGAGGATCATAAAATTATTGTAAATATTGACAAACCGCTCAGTACCTTGGCAGAGGATTATTGTGTAAGAGAGTATTTTGCAGTATGCTCGTGGTACCATGGGAATGAAATTTCTCTTCAATTGAATGCTCCGAACCTTGAAATTTTATTGCTACACTTTAGGATACGACCTTCCTTGAATTTATCACATGCAACATTTGAAGAAATGAAAGGGCTCAAGGTTTTCTCTTTAATCAATGATTTCTATCTTAGAGCACCATGGACATTGCCTCAATCACTCCAGTTGTTGTCAAATCTTCAAACTCTGCGCTTGAACAATTGGGAGTTAGGTGATATTTCTTTCATAGCAAGCTTAACAATACTTGAGGTTCTTGACTTGCAAGATTGTAGCATAAATGAACTTCCTAACGAAATTGGAAAACTGAAAAGATTGAAGCTGCTAGATTTGTCAAGATGTCGTATTGAAGAAAAAATCTATAATGGAGCAATAGGAAAATGTTCACAACTAGAAGAGTTATATCTTGCAGAATCTTGCTCTGACAAGTACATTTGCCAGAGCATTGTGGATATTTTTACTCTCCCAAAGCTGCAGAGGTTTGTAATACATACTCATTGGTTCGAAAGCTGCAGTAGTTTTATCACGGAGGGAATGACTAGAGTTTTGGAACTAGTGGATTTTAATATATCCAACTTGAAGGCATCTGGAAGGAAACTTCTACAAAAAGCTGAGACCGTTTTATTGAGAAGCCTTCACGGAGGATGTAAAAATATCACCCCAGATATGATCAGAGGCAAGAATGATTGGATTAGTCTCCATCTCCTTGATTGTGCAGAGGTAGAGTGCCTCTTTGATATAACGTCTGATTCTGCAGATGCGTTGATTCCCAGTTTGGTCGAGTTACAGCTGCAAAGTTTGATAAACTTGAAAGAATTGTATCAAGGTCCACCTCTGCCAGTGCTCTGCTTCTTTGAGAAATTACAAAAAATCCATATATATGATTGCCCACTATTGCAAAGGATATTTCCATGGCAATGTAACTTAAGAAATCTCAAAATCCTCATAATAGAAAAATGCTCGTCAGTTGAAGTACTCTTCTCAATATCAGTTGCCCAAAGTCTGCAGCAGCTGGAAGAGTTTACTATAGAACATTGTGATGAATTGAAGCATATAATTGCAGGTGGAAGAGAGGATGGCTCTAATACAAGCAGGGAAGTAGTTCCAGCTCTTGTGATGCCCTGTTTGAAGAAAGTTTCGATTGATGATTGTGTTAAGTTAGAGTTTATATTCCCAATGTGTTGTGTTGAAGGACTTGCACAATTGGAAGAGATAAATATCAATAGTTGCCATGAGTTGAAATATGTATTTGGGGAATGTTATCACTTTGATCATTCATCTCACCAATACAATAACCATATCATGCTTCCTCATTTGGATGAAATCATCCACTTGCCCTCAAAACTGCAAGAACTTTGTTTACATGGTTTACCTCAACTGAACCTTATATCATGGGTGGGTCTTACTCCCGGACAGATTTTGAGATTCCAAGGTCTTCGGCAATTACTATTGTTTCATTGTGAAAACTTGAAATCTCTGTTCTCCATGGCAGCACATAGAAGCTTACCAGAGTTGATGTCCCTTCATATACGTGGCTGTCAAGAATTGGAACAAATCATTGAAAAAAATGAAGAACTTGAGCAGCACCTATCCAATGCTGAAGTGTTTTTTCCAAAGCTAACAGATATAGAGATCGAAGGATGCAACAAGTTGAAAAGCCTTTTCTCTGTCGCTATGGTTAGAATGCTTCCACAATTGAGACGTCTTAGTATAGAGAAGGCTACTCAACTAGAAGAGGTTTTTAGACATGGCAGTGAAGACAGCACTATCAATGAAATAGAAATTGTGCTTCCAAACTTAACAGAGGTAGACCTGGAAAATCTGCCGAGTTTTGTTGATGTCTGCCAGGGTTTTAACTTACAGGCCCTAAAACTTAAACAACTGAAAATAGAAGAATGCCCCAAAGCTGCTTCGAGTTTGAGAGCAATTCAGGTGACTCCTCTTCCCTGCAAACCACGAGTACTGACATAA 3558 0.385 MDFISNIARAVVTSVATSGAKYLVDPAIREGQYFFFPNKVITDLENEKKELTSERGSMLFRVQQAKERTEVIEEPVDKWLKDVENILKEVEKLEQRMDTNNNCFEGWCPTWGRYLLCKQLAKKIEEMGKFKAKSNIQPFSHLAPLPGIQYLSSENFTSFESTKVAYTQLWEALKNDGIYMIGVYGTGGSGKTTLVTEVGKKAEQLNLFDKVILVTVSQSPNIINIQQKMADMLSLKLEEQNEDARAQRLWLCLKQKKRILIIIDDLWKKFELKNIGICLDNDSKGRWKVLLTTRRQGVCSSMDCQKSIYLDLLSKDDSWTLFQKHANIDDDFSKSLNDVPRELCDECNGLPLVAVAVGSSLKGKSKAEWEMSLDSLRHPDTIDDQVEEEVRDAFTCLKLSYDYLDDKAKLLFLICSMFPEDFEIDIEALIRYAVGLGLGGRFSLDSARSWIRSGINKLSDSCLLMHVEKRKNHVKMHDMVRDVASWIAKTSEDHKIIVNIDKPLSTLAEDYCVREYFAVCSWYHGNEISLQLNAPNLEILLLHFRIRPSLNLSHATFEEMKGLKVFSLINDFYLRAPWTLPQSLQLLSNLQTLRLNNWELGDISFIASLTILEVLDLQDCSINELPNEIGKLKRLKLLDLSRCRIEEKIYNGAIGKCSQLEELYLAESCSDKYICQSIVDIFTLPKLQRFVIHTHWFESCSSFITEGMTRVLELVDFNISNLKASGRKLLQKAETVLLRSLHGGCKNITPDMIRGKNDWISLHLLDCAEVECLFDITSDSADALIPSLVELQLQSLINLKELYQGPPLPVLCFFEKLQKIHIYDCPLLQRIFPWQCNLRNLKILIIEKCSSVEVLFSISVAQSLQQLEEFTIEHCDELKHIIAGGREDGSNTSREVVPALVMPCLKKVSIDDCVKLEFIFPMCCVEGLAQLEEININSCHELKYVFGECYHFDHSSHQYNNHIMLPHLDEIIHLPSKLQELCLHGLPQLNLISWVGLTPGQILRFQGLRQLLLFHCENLKSLFSMAAHRSLPELMSLHIRGCQELEQIIEKNEELEQHLSNAEVFFPKLTDIEIEGCNKLKSLFSVAMVRMLPQLRRLSIEKATQLEEVFRHGSEDSTINEIEIVLPNLTEVDLENLPSFVDVCQGFNLQALKLKQLKIEECPKAASSLRAIQVTPLPCKPRVLT 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2425g00001 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 415 IPR027417 -
Gabi2425g00001 1185 Pfam NB-ARC domain 167 402 IPR002182 GO:0043531
Gabi2425g00001 1185 Gene3D Ribonuclease Inhibitor 960 1112 IPR032675 -
Gabi2425g00001 1185 Coils Coil 76 103 - -
Gabi2425g00001 1185 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 930 1083 - -
Gabi2425g00001 1185 Gene3D - 401 485 IPR036388 -
Gabi2425g00001 1185 SUPERFAMILY L domain-like 473 942 - -
Gabi2425g00001 1185 Gene3D - 312 400 IPR042197 -
Gabi2425g00001 1185 PRINTS Disease resistance protein signature 347 361 - -
Gabi2425g00001 1185 PRINTS Disease resistance protein signature 630 646 - -
Gabi2425g00001 1185 PRINTS Disease resistance protein signature 180 195 - -
Gabi2425g00001 1185 PRINTS Disease resistance protein signature 253 267 - -
Gabi2425g00001 1185 SUPERFAMILY RNI-like 966 1163 - -
Gabi2425g00001 1185 FunFam Probable disease resistance protein At1g61300 152 307 - -
Gabi2425g00001 1185 Gene3D Ribonuclease Inhibitor 761 955 IPR032675 -
Gabi2425g00001 1185 Coils Coil 1042 1065 - -
Gabi2425g00001 1185 Gene3D Ribonuclease Inhibitor 519 737 IPR032675 -
Gabi2425g00001 1185 Gene3D - 151 310 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2425g00001 Gabi-Chr2425 10081 23792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2425g00001 178 881 WRKY Transcription Factor Family AT5G45050 23.602 7.10e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2425g00001 - - aprc:113855292 1093.57