Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2424g00028 ATGGTGGTTGCAGGTGGTGGTTCCGTCGACATGAAGATGAAGGCCCTCGCCATCCAAGTCGTCACTGGTCGGTGGTTCGTGGTGTTTGCCTCCTTCCTAATCATGGCAGTCTCCGGAGCCACCTACATGTTCGGCCTTTACTCCGGCGACATAAAAAATTCTCTTGGCTACGACCAAACCACTCTCAATCTCCTCAGTTTCTTCAAGGACTTGGGTGCCAATTTCGGTGTCTTATCAGGACTAATCAACGAGATCACCCCACCCTGGGTGGTTCTAGCCATGGGTTCGGTTCTTAACTTCTTTGGCTACTTCATGATATGGCTAGCAGTGACTGGAAGAATAGCCAAACCTCAAGTGTGGCAGATGTGTCTCTATATCTGCATAGGTGCTAACTCTCAGTCTTTTGCAAACACTGGCTCTCTTGTCACTTGTGTTAAGAACTTCCCTGAAAGCCGTGGTGTTGTGTTAGGCATCCTCAAAGGTTACGTGGGTCTCAGTGGAGCCATCATCACACAGTTATACTTTGCTTTTTATTACAATGACTCAAAGGCTTTGATTTTGCTCATAGCTTGGCTTCCAGCTGCTATATCTTTTGCTTTCCTGAGAACTGTTCGATACATGAAGCCAGTTCGACAGCCTGATGAGCTCAGTGTTTTCTACAAATTTTTGTATATTTCTCTTGGCCTTGCTGGGTTTCTATTGGTTATGATCATAGTACAGAAAAAGGTCTCTTTCAAACGAAGTGAGTATGACGTGAGTGCTGCCGTGGTGCTTTTCTTGCTCTTCCTCCCAATTGCTGTTGTTTTTTGTGAAGAATACAAGACCCGGAAGAGTCAAAAGCTTGCATTCGTTGATGATCCCTTGCCAGTGTTGAAAATTGTAACTGATGAAGAGGAGTCTGTGACTGCGACTGCGAATGGGAACAGATCTGAATATTCAGCACCAACATCAAACAACAGTACTACTAATGCAACGGAAGAAATTAGATGGTGGCAAAATGTTTTTACCCCACCCGAAAGAGGTGATGACTATACCATACTTCAAGCGCTTTTTAGCATAGACATGATATTACTATTCCTCGCTGGCACTTGTGGTGTTGGTGGCACTTTAACAGCAATTGACAATCTGGGTCAGATTGGAACCTCACTTGGATACCCAAAGACAAGCATAAGCACATTTGTGTCACTGGTGAGCATTTGGAATTTTCTAGGACGAGTTTTTTCTGGTTTTGTCTCTGAACATTTCCTAACAAAATACAAATTTCCTCGACCTCTCATGCTCACCCTGACTCTGCTCTTATCCTGCGTCGGTCATCTACTGATAGTCTTTGATGTGCCCAATGGTCTCTATGTAGCTTCAGTAATTATTGGGTTCTGTTTTGGTGCACAGTGGCCATTAGTCTTTGCCATAATTTCGGAGCTGTTTGGACTAAAGTACTATTCAACTTTGTACAACTTTGGCGGGGTAGCGAGCCCAATTGGCCTTTATGTGCTTAATGTGATGGTAACTGGCCATCTGTATGACAAAGAAGCTAAGAGGCAATTGGGTGCATTGGGGATCCCAAGAAAGGTGGGACAGGAATTGAATTGTGTTGGAGCCAGTTGTTTCAAGTTGTCCTTCATTATTATCACTGCAGCAACTTTCTTCGGTGCCATTATTTCGGTCATTTTGGTTGCTAGGACCATTAAGTTTTATAAAGGTGACATTTACAAGAGGTACCGAAAGCAGGACGACGGAGCCACGGCTGAGATGGCGGTTGCCCAGAACGGCGGCGAGAGAGGACAAGATACCAAAGTTGGGATGTAA 1806 0.4463 MVVAGGGSVDMKMKALAIQVVTGRWFVVFASFLIMAVSGATYMFGLYSGDIKNSLGYDQTTLNLLSFFKDLGANFGVLSGLINEITPPWVVLAMGSVLNFFGYFMIWLAVTGRIAKPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYFAFYYNDSKALILLIAWLPAAISFAFLRTVRYMKPVRQPDELSVFYKFLYISLGLAGFLLVMIIVQKKVSFKRSEYDVSAAVVLFLLFLPIAVVFCEEYKTRKSQKLAFVDDPLPVLKIVTDEEESVTATANGNRSEYSAPTSNNSTTNATEEIRWWQNVFTPPERGDDYTILQALFSIDMILLFLAGTCGVGGTLTAIDNLGQIGTSLGYPKTSISTFVSLVSIWNFLGRVFSGFVSEHFLTKYKFPRPLMLTLTLLLSCVGHLLIVFDVPNGLYVASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGVASPIGLYVLNVMVTGHLYDKEAKRQLGALGIPRKVGQELNCVGASCFKLSFIIITAATFFGAIISVILVARTIKFYKGDIYKRYRKQDDGATAEMAVAQNGGERGQDTKVGM 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2424g00028 601 Pfam Major Facilitator Superfamily 377 557 IPR011701 GO:0022857|GO:0055085
Gabi2424g00028 601 Gene3D MFS general substrate transporter like domains 331 565 IPR036259 -
Gabi2424g00028 601 CDD MFS_Mch1p_like 23 551 - -
Gabi2424g00028 601 SUPERFAMILY MFS general substrate transporter 24 562 IPR036259 -
Gabi2424g00028 601 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 571 - -
Gabi2424g00028 601 MobiDBLite consensus disorder prediction 302 323 - -
Gabi2424g00028 601 FunFam Nodulin family protein 346 567 - -
Gabi2424g00028 601 Pfam Nodulin-like 24 269 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2424g00028 Gabi-Chr2424 272284 274099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2424g00028 1 576 Nodulin-like Gene Family AT2G39210 69.271 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2424g00028 - - gmx:100808975 910.598