Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2424g00001 ATGACTCAAAAACCCTCCTGGAACCAGCCTTTCACTTCTTCAGATCGAGATTCGGAAACATGCAGAGGCGAAGGTCGATCTTTCCTGGGCGCAATCGATGTGAAGCGGTTGCCTTATGGGGTTGATTGTGAAGAGGAGGGTGGTGTTTCATCCCCAAACAACACCGTTTCGAGTGTGAGCGGTAAGCGTAGCGAGAGAGAGAACAACGAGGAAGAACATGACATAGACAGAGCTTGTTCTAGAGGAATCAGCGACGAAGAAGACGGTGAAACCTCAAGGAAAAAACTTAGGCTCTCCAAAGACCAGTCAATTATTCTTGAAGAGGGATTCTTTTTACTGGAGACACAATCCTTTGTTTTGGATATTCTTCTAATATTTACTCGGTAG 387 0.4548 MTQKPSWNQPFTSSDRDSETCRGEGRSFLGAIDVKRLPYGVDCEEEGGVSSPNNTVSSVSGKRSERENNEEEHDIDRACSRGISDEEDGETSRKKLRLSKDQSIILEEGFFLLETQSFVLDILLIFTR 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2424g00001 128 MobiDBLite consensus disorder prediction 63 94 - -
Gabi2424g00001 128 MobiDBLite consensus disorder prediction 43 94 - -
Gabi2424g00001 128 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 34 110 - -
Gabi2424g00001 128 MobiDBLite consensus disorder prediction 1 22 - -
Gabi2424g00001 128 MobiDBLite consensus disorder prediction 1 16 - -
Gabi2424g00001 128 MobiDBLite consensus disorder prediction 48 62 - -
Gabi2424g00001 128 Pfam HD-ZIP protein N terminus 5 67 IPR006712 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2424g00001 Gabi-Chr2424 1023 1867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2424g00001 3 110 Homeobox Transcription Factor Family AT5G47370 50.413 3.05e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2424g00001 K09338 - gmx:100813367 166.777