Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2422g00003 ATGGAAGCAAAAGGTGGAGAAGTGAGAAGACTTCACATCATCTATTTCCTTAGTCATATGGGTGGTCATGCAGATCAACCCCATCTCATTCGTGTTCTTCATCTAGCTCGAAATGGGGTTTATCTTAGAGATGTTAAGAGATGGCTTGGGGATTTGAGAGGAAAAGACATGCCTGAAGCTTTTGCTTGGTCCTACAAGAGGAGGTACAAGACTGGATTTGTGTGGCAAGATTTGTTGGATGATGACCTTATAACCCCCGTTTCTGACAATGAATACGTCCTCAAAGGATCACAAATCCACCCTTCCCCATTTGAAACTCCTTCACTTGATGAAAAGAAAACTGTTAGTGATATAATGGCTGAGAAGGAATCCCCTCAAGCACAAGTTGTAGAGGACAAACAACAGCAACAGCAACAACCATCTCCATCAGAAGAAGAACCTCAAATTCAAAGGAATCCTGATTCAAAAACGGATACTCCAACAAAAGGGTCATCAGAAATCAGCCAGGATTCGTTAGTCTTCAGCTCAGAAAGGTCATCTGTGACAGATGATTACTCTTCTAAAGTTGAAGAAGAGAAGCTTTTGGGGACAGGCAAAGAGTGTTTCAATGAACAGAACCATCACGAGAAGAAGTTAGAGAACTGCTCATTGCCTTCCTTGTATCACAATCTGTTGAGTAAGAAGGGTAACAAAATTGACCAGAATAAAACTAGTACACCTGATTCATCATTTTCTACTACATCATCATCGTCATCATCATCTCAATCCTCCTTTGCTAAGATCAGAAGCAATTCTACTAGAGTTTCTAAGGTGTTCCGCAATTGGATTTCTTGTGGCAATGTGGAAACAAATGATGCAGCCTTAGTCCTGATGAATGGGGCTCAGAAAAATGTCTTTAAGGATCCTAACAACATACCAGACAATAAGGCTGTGATTTGTAAAGGGGACAAATTGGGAGGATCAGCAAGGTGTTCTGGGACATCTTGGATTCATCATCATCAACAGTCACAGAAACAACAATATGGCTCCAGAAAAAGCTTTGATGGAGAGGAAACAAACAGGAGCAGGAAAACTTTAGGCGAGTTCATGAATATTCAAAAACCTTACAAACCATTTGGTGGACCAACTTGCTCGCAATGTGGAAAGACATTCAAGCCTGAGAAAATGCACAAACATATGAAGTCCTGTAAAGGAATAAGAAGCGTGGGAACTTCAGCTGCAACTGCTGAGAAGACACAGCTCCAGAAATCACCAACTTCCACCTGTGAAGATCACCTTTTGACCAACTAA 1290 0.4124 MEAKGGEVRRLHIIYFLSHMGGHADQPHLIRVLHLARNGVYLRDVKRWLGDLRGKDMPEAFAWSYKRRYKTGFVWQDLLDDDLITPVSDNEYVLKGSQIHPSPFETPSLDEKKTVSDIMAEKESPQAQVVEDKQQQQQQPSPSEEEPQIQRNPDSKTDTPTKGSSEISQDSLVFSSERSSVTDDYSSKVEEEKLLGTGKECFNEQNHHEKKLENCSLPSLYHNLLSKKGNKIDQNKTSTPDSSFSTTSSSSSSSQSSFAKIRSNSTRVSKVFRNWISCGNVETNDAALVLMNGAQKNVFKDPNNIPDNKAVICKGDKLGGSARCSGTSWIHHHQQSQKQQYGSRKSFDGEETNRSRKTLGEFMNIQKPYKPFGGPTCSQCGKTFKPEKMHKHMKSCKGIRSVGTSAATAEKTQLQKSPTSTCEDHLLTN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2422g00003 429 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 5 413 IPR010369 -
Gabi2422g00003 429 MobiDBLite consensus disorder prediction 228 260 - -
Gabi2422g00003 429 MobiDBLite consensus disorder prediction 402 429 - -
Gabi2422g00003 429 MobiDBLite consensus disorder prediction 327 343 - -
Gabi2422g00003 429 MobiDBLite consensus disorder prediction 124 188 - -
Gabi2422g00003 429 MobiDBLite consensus disorder prediction 324 354 - -
Gabi2422g00003 429 Pfam Protein SOSEKI, plant 12 292 IPR010369 -
Gabi2422g00003 429 MobiDBLite consensus disorder prediction 129 182 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gabi2422g00003 DUF966 5.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2422g00003 - - gmx:100785001 580.096