Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2421g00003 ATGATGGCTCAGAAACACTTGCACGAGCTACTGAAGGAGGATCAAGAGCCATTCCTTCTAAAGAACTACATTTCCGACAGGCGCAGCCAGTTGCTGAAAGTGCATTCCCCGAAGACCATTTTGCAAGTGAAGAAACAAAAACCAATCCATCAAAAGATTCAAAACTCAAGCTTCCCCGTTAACCTCTGCAAAAATGCTTGCTTTCTTTCCTTACAGAACACCCCAGATATCAGAAAATCACCACTCTTCGAATTCAAATCCCCAGAAAAGAGCCCCTGCAGGTCCTCCAACAACAACACCATCTTCATCCACATCCCTGCAAGAACAGCATCGCTTCTCCTCGAAGCCTCTCTCAGGATTCAGAAAAAGTCAAAGACGAAAACCCACAACAAAAACAACGGCTTTGGCCTATTGGGTTCGTTCTTCAAGAGACTAACTTCACGAAGCAGGAGCAGAAACAGGGAAATAGAAGGTAACAACAACGTTAAGGTGTCGGTTAAGGATATCTTGAGGTGGGATTCCTCTGTTGGAAGAAGAAAACCTTCCAATGGAAGAGGGAAGGAGCAAGAAAACAAGGATGTTATTGTTGCTGCTGCTTCTGAGGTGTGTTCCTGTGAGGTGGGTTTCACCTGTTCTTGCAATGGCAGTGTTGTGTGGTCAGAGACCAACGAGGACAAATCGATGGACATGGAAACTTCGAGTAGTGGCCACTCTTATGACTCTGCTGACGAAGAAGCTCAATTTCCGAACAAACAGAAAGAAAAGGATGAATGTGCTTGCTTTGATGATCATGGCTTCTTCTGTGAAAGCCCTTTTCGTTTTGTCCTCCAAAAAAGCCCCTCCTCCTCCTCCGGCCGCCGTACGCCGGAATTTTCCTCGCCGGCGCTGTCGCCGAGTCGCAACAGAACAGAGGACAATGAAAGTAAAGGAGATGATAGCCACAACAAATTCCAATCAGGGGAAGAAGAGGAAGAAGAGAAGGAACAATGCAGTCCAGTTTCTGTTTTAGACCCACCCTTTGGGAATGATGATGATGATGATGTGCATGAAAACGACGAAGATGATGAAGAGGGTGGTTTTGATTTGGAGTGTAGCTATGCCAATGTACAAAGAACTAAGCAGCAGCTATTAGACAGGCTTAGTAGATTTGAGAAACTTGCGGAGTTAGATCCAATAGAACTTGAGAAAAGAATGCTAGATCAAGAAGACAACGAGTATGAGACATTTATTGAAGAGGATGATAGTGAAACATCATGTGAAGAAGAAAAGGGCATGAGAGAAATAGTCTTTGAAATCCTATGCCAATCAAGCGTTCATGACAGAAAGCAAGCCCCAGAAGAACTTAAGAGACTAGTGTATGATCTCATAATGGAGGAAGAGAGAGAGGCTAATTATTCAGAAAATAGGGACATGGTGATAAGAAGGGTTTGTGGGAGGTTGGAACTATGGAAAGAAGTGGAGTCCAACACCATTGATATGATGATAGAAGAGGACTTGTCTAGAGAGGAAGGTGGGTGGAAGAAAAATGATGTGCAAACAAGAGACTTGGTTGGGGAACTTGAGCTTGCTCTCTTTGGCTTTCTAGTGGAGGAACTAGTGTGTTAA 1605 0.4411 MMAQKHLHELLKEDQEPFLLKNYISDRRSQLLKVHSPKTILQVKKQKPIHQKIQNSSFPVNLCKNACFLSLQNTPDIRKSPLFEFKSPEKSPCRSSNNNTIFIHIPARTASLLLEASLRIQKKSKTKTHNKNNGFGLLGSFFKRLTSRSRSRNREIEGNNNVKVSVKDILRWDSSVGRRKPSNGRGKEQENKDVIVAAASEVCSCEVGFTCSCNGSVVWSETNEDKSMDMETSSSGHSYDSADEEAQFPNKQKEKDECACFDDHGFFCESPFRFVLQKSPSSSSGRRTPEFSSPALSPSRNRTEDNESKGDDSHNKFQSGEEEEEEKEQCSPVSVLDPPFGNDDDDDVHENDEDDEEGGFDLECSYANVQRTKQQLLDRLSRFEKLAELDPIELEKRMLDQEDNEYETFIEEDDSETSCEEEKGMREIVFEILCQSSVHDRKQAPEELKRLVYDLIMEEEREANYSENRDMVIRRVCGRLELWKEVESNTIDMMIEEDLSREEGGWKKNDVQTRDLVGELELALFGFLVEELVC 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2421g00003 534 MobiDBLite consensus disorder prediction 224 249 - -
Gabi2421g00003 534 MobiDBLite consensus disorder prediction 278 360 - -
Gabi2421g00003 534 MobiDBLite consensus disorder prediction 340 360 - -
Gabi2421g00003 534 MobiDBLite consensus disorder prediction 278 301 - -
Gabi2421g00003 534 PANTHER OS04G0572500 PROTEIN 2 534 - -
Gabi2421g00003 534 Coils Coil 366 386 - -
Gabi2421g00003 534 Coils Coil 392 412 - -
Gabi2421g00003 534 MobiDBLite consensus disorder prediction 302 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2421g00003 Gabi-Chr2421 88866 91962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2421g00003 1 340 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 45.609 1.66e-66 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2421g00003 - - gmx:100790018 546.969