Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi241g00030 ATGCCTCAGAATAAGATTTTCCATGATCCATCACAGAATCAGATTCCTGATCTTTCCTTGCACATTAGTCTCCCAAACAGTGCTCCTTCTTCAATTTGCACTGGCACACATGAAGGGGATTCACACTTTGATATATGGAGAGCAGAATCTGATGGCCTCAGATCCCATAGTGATGGTTCAATCAAAGGAATTCCTCACACAGACACAGAACTTTCCTTAGCAAACAACCCCACAACACCATCTGAGGCTGAGAGTCCCTGGAAGAGAAACTTTGTTAGAGTGAGACAAGAAGTTGCTGCAGCAAGGGAAAAAAATCATGGGGTCTCAGATGAGGGTGTCATTAGACCCATCAATGGAATCCCTCTCTACAGTAATAACTTCTCTTCTTTGGACAACAATCCCTCAATAGAGAGGGACTCCAAGTTTTCTCTATGTGCACTTCCTTATCCTTCTTGTTCTGCTAATTCTGCTTCTTGTAATGATGGTATTGCTGGGGGTGTAGAACAAATCTCAAGGTTTAATGGGATAACCTTGGAGAGTCTAAGACAACAGCAGTTTCAGTACTTGGACCATAATCAAAATCATCAACAGCAGCAGCAGCATCAGTTTGGGATTGGAGCTTCTGATTACTCAAATGGATTTGTAAGGTCAAGAGTAATGTTGCCAAGGCAACAAATTAAGAGGAACATGAGGGCTCCAAGAATGCGTTGGACTAGTTCTCTTCATAGTAGATTTGTTCATGCTGTTGAGCTACTTGGAGGCCATGAAAGGGCTACTCCCAAGTCAGTTTTGGAGCTCATGGATGTCAAAGATCTAACACTAGCTCATGTTAAGAGCCATTTGCAGATGTATAGGACTGTTAAGAACACTGACAGGCCAGCAGCTTCTTCAGATGGAGATGAGGATTTCATGTCCCTAACACCACCCCATAATCAAAATAACAACAGTTTGTCCAATCAGATAGGACCTCAAAATGCATCTGATCTAGACCATGATATGTGCTACACTTCTAGCAATCTATGGGGTAATTCTTCTTCCAGTAGAGGAGCATGGATGCAAGCTAGTTCCCTAGATTTGAATGAGCTTAGTCCACAAGAAATCCTATCATCTCAGCATATTGGGAAGCTTTCCGAGGGAAGCAACTACATACAATCAAGAAGCTTGAAGAATCAAAATTTAGATTGTCAAAATCCAAGCTTGGAGTTCACATTAGGGAGATCAAATTGGCACACCAATGAACATGCCTAA 1248 0.4199 MPQNKIFHDPSQNQIPDLSLHISLPNSAPSSICTGTHEGDSHFDIWRAESDGLRSHSDGSIKGIPHTDTELSLANNPTTPSEAESPWKRNFVRVRQEVAAAREKNHGVSDEGVIRPINGIPLYSNNFSSLDNNPSIERDSKFSLCALPYPSCSANSASCNDGIAGGVEQISRFNGITLESLRQQQFQYLDHNQNHQQQQQHQFGIGASDYSNGFVRSRVMLPRQQIKRNMRAPRMRWTSSLHSRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDRPAASSDGDEDFMSLTPPHNQNNNSLSNQIGPQNASDLDHDMCYTSSNLWGNSSSSRGAWMQASSLDLNELSPQEILSSQHIGKLSEGSNYIQSRSLKNQNLDCQNPSLEFTLGRSNWHTNEHA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi241g00030 415 MobiDBLite consensus disorder prediction 69 85 - -
Gabi241g00030 415 FunFam Myb family transcription factor 231 289 - -
Gabi241g00030 415 NCBIfam myb-like DNA-binding domain, SHAQKYF class 233 286 IPR006447 GO:0003677
Gabi241g00030 415 SUPERFAMILY Homeodomain-like 230 287 IPR009057 -
Gabi241g00030 415 Gene3D - 232 289 - -
Gabi241g00030 415 MobiDBLite consensus disorder prediction 54 85 - -
Gabi241g00030 415 MobiDBLite consensus disorder prediction 288 327 - -
Gabi241g00030 415 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 414 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gabi241g00030 415 MobiDBLite consensus disorder prediction 306 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi241g00030 Gabi-Chr241 112760 120280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi241g00030 213 410 G2-like Transcription Factor Family AT5G16560 49.519 4.48e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi241g00030 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi241g00030 - - lang:109340070 506.138