Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2417g00002 ATGGAAACATATTTTCCTTTGATTCTGCTTGCCACAGTGGTTATGGCGAAGCCACTATCTTTTGGGACAAAAGAAAACCAACTTTCTTACAACTACTACGAGTTTTCATGCCCAAACTTGGAAACTGTAATCAAGAGTGAATCGCTAAGCTTATTCTTGACAGATGCTACTGCACCAGCAGCATTTCTCAGGCTCATGTTTCATGACTGCCAAGTTCAAGGATGTGATGCCTCAATTTTGTTGGACTCCAACTACCTTACTTCCAGCTCTGAAATGATTTCTTCGAGAAACTTTGGCATCAGAAAGCGGGACACGATTAGTCACATAAAGTCAGTATTAGAAGAAGAATGTCCAGGACAGGTGTCTTGTGCAGATATCATTGTATTAGCTGCTAAGGAATCAGTGTCTTTCTCTGGAGGACCCCATATTCAAGTCCCGCTTGGAAGAAAAGACTCTAGAAAATGTAGTTTCGAGGAGGCTGATGCTGAGCTTCCTTCACCGACAATAACGGTTGATGAATTTTTATCCATTTTCATGTCTAAAGGAATGAACATTGAAGAATCTGTTTCCATTTTAGGAGCGCATACGCTAGGTGTTGGACACTGCTTAAACATTGCTGGCAGATTGTATGATGCACGGCCAAGGGACAACATGGATTTTGAGTTTGAAGCCTCACTAAGAATGGCATGCCCAACTGAGATTCCTCTGACAAACCTCACATTTGTGCCTAATGACATGACCCCCGTGATATTTGACAACCACTATTACCGAGACATTATAATGGGGAGAGGCTTGTTTGGTATTGACGCAAGCATTTCTAGACATCCCCGAACTGCACCCTTTGTCATGCGGTTTGCTATGGATCAGAACTACTTCTTCGAGGCTTTCTCATCTGCATTTGTTAAGCTATCTTCGACCAATGTTCTCACAAATGGGCACGGTGAAGTCCGAAGGCAATGCAACCGGGTAAACTAA 975 0.4277 METYFPLILLATVVMAKPLSFGTKENQLSYNYYEFSCPNLETVIKSESLSLFLTDATAPAAFLRLMFHDCQVQGCDASILLDSNYLTSSSEMISSRNFGIRKRDTISHIKSVLEEECPGQVSCADIIVLAAKESVSFSGGPHIQVPLGRKDSRKCSFEEADAELPSPTITVDEFLSIFMSKGMNIEESVSILGAHTLGVGHCLNIAGRLYDARPRDNMDFEFEASLRMACPTEIPLTNLTFVPNDMTPVIFDNHYYRDIIMGRGLFGIDASISRHPRTAPFVMRFAMDQNYFFEAFSSAFVKLSSTNVLTNGHGEVRRQCNRVN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2417g00002 324 PANTHER - 9 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 Gene3D - 31 324 - -
Gabi2417g00002 324 Pfam Peroxidase 51 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 CDD secretory_peroxidase 27 323 IPR033905 GO:0004601|GO:0042744
Gabi2417g00002 324 SUPERFAMILY Heme-dependent peroxidases 27 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 Gene3D Peroxidase, domain 2 165 303 - -
Gabi2417g00002 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 FunFam Peroxidase 165 303 - -
Gabi2417g00002 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2417g00002 324 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2417g00002 Gabi-Chr2417 36102 37478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2417g00002 74 324 Peroxidase AT3G17070 54.688 9.70e-89 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2417g00002 K00430 - gmx:100806951 553.132