Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2410g00021 ATGATGTCACTACTTCTACTTCTTCTCTGCCTAACTCTTCCTCTGCTTCTATTGTTCTTCTTCCACAAACATAGAACCATTAACAATCCACCCCTTCCACCTGGTCCTAGAGGCCTTCCCATAATTGGGAATCTTCATCAACTAGACAATTCTGTTCTTTATCTTCAACTATGGAAACTCTCAAAAATATATGGTCCCTTATTTTCCCTTCAACTCGGTTTAAGGCCAGCTATTGTTGTTTCATCACCTAAAATTGCCAGAGAGGTACTCAAAGACAATGACCTTGTGTTTTCTGATCGACCTAACTTACTTGGCCAACAGAAATTGTTCTATAATGGGTTAGAGATTGTGTTTTCTCCATACAATGATTCTTGGAGAGAAATAAGAAAAATTTGTGTTGTCCATATCTTTAGCTCAAAGCGTGTGTCATGTTTTTCCTCTATAAGAGAGTTTGAAGTCAAGCAAATGATCAAAAAGATATCAGGGCATGCTTCTTCTTCTGTTGTTACAAACTTGAGTGAGTTATTCATTTCTCTTTCAAGCACTATAATATGTAGGATTGCTTTTGGGAGAAGGTATGTGGATGAAGGAGCTGAAACAAAAAGGTTCCATAAGATGTTCAATGAGCTTCAAGCTATGGTAACCGCATTCTTTGTTTCAGATTATATTCCATTTTTGGGTTGGGTTGATAAAGTTACAGGTCTAAATACACGTCTGGAACGAATTTTCAATGAGTTTGATAAATTCTACCAAGTGGTTATTGATGAACACTTGGATCCGAATAGACAGCAGGTGGAGGAACAGGATATAGTGGATGTTTTACTTCAACTGAGGAAACGGCGTTCCTTTTCAATTGATATCACTTATGATCACATCAAAGGGGTCCTTACGGACCTACTTATAGCAGCAACGGATACCACTGCAGCCACATCAGTTTGGGCTATGACGACCCTCATAAAAAACCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTTGGAACTTGGGAGGTAAAAAAGATTTCTTGGATGAAGATGATATTCAAAAGTTTTCCTATTTGAAGGCGGTGATAAAAGAGATATTGAGATTGTACGTAACAACCCCATTACTTGTGCCAAGAGAATCAAATAAAAATTGCATTATAGATGGCTATCAAATTCCAGCCAAGACAATAGTGTATGTGAATGCTTGGGCTATTCATAGAGACCCAGAGGCTTGGAAGGACCCAGAAGAGTTTTATCCTGAGAGATTCTTAGACAGTGCTATAGATTTTAGGGGACAAGATTTTGAACTAATTCCTTTTGGAGCAGGTCGTAGAATTTGCCCAGGTTTGCATATGGGGGTTGCCACATTGGAACTTATCCTAGCTAATCTTCTTAATTCCTTTGATTGGGAATTGCCAAAAGGATTGGTAAAGGAAGACATAGATACTGAAGTGTTGCCAGGAATTACTCAACACAAGAAAAATCCTCTCTGCCTTTCTGCCAAGCGCCATATGGATTTGATGACAAATGGAGTCAAATATGAAGATATGGATAAAGGGAGATCAAATCAGAAGATATGA 1563 0.3813 MMSLLLLLLCLTLPLLLLFFFHKHRTINNPPLPPGPRGLPIIGNLHQLDNSVLYLQLWKLSKIYGPLFSLQLGLRPAIVVSSPKIAREVLKDNDLVFSDRPNLLGQQKLFYNGLEIVFSPYNDSWREIRKICVVHIFSSKRVSCFSSIREFEVKQMIKKISGHASSSVVTNLSELFISLSSTIICRIAFGRRYVDEGAETKRFHKMFNELQAMVTAFFVSDYIPFLGWVDKVTGLNTRLERIFNEFDKFYQVVIDEHLDPNRQQVEEQDIVDVLLQLRKRRSFSIDITYDHIKGVLTDLLIAATDTTAATSVWAMTTLIKNPRVMKKVQEEIWNLGGKKDFLDEDDIQKFSYLKAVIKEILRLYVTTPLLVPRESNKNCIIDGYQIPAKTIVYVNAWAIHRDPEAWKDPEEFYPERFLDSAIDFRGQDFELIPFGAGRRICPGLHMGVATLELILANLLNSFDWELPKGLVKEDIDTEVLPGITQHKKNPLCLSAKRHMDLMTNGVKYEDMDKGRSNQKI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2410g00021 520 CDD CYP71-like 64 491 - -
Gabi2410g00021 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Gabi2410g00021 520 SUPERFAMILY Cytochrome P450 33 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 FunFam Cytochrome P450 83B1 20 494 - -
Gabi2410g00021 520 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 PANTHER CYTOCHROME P450 71B11-RELATED 13 496 - -
Gabi2410g00021 520 Gene3D Cytochrome P450 26 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00021 520 Pfam Cytochrome P450 33 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2410g00021 Gabi-Chr2410 309510 313646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2410g00021 6 499 Cytochrome P450 AT4G31500 46.881 3.91e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2410g00021 - - gmx:100787727 742.265