Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2410g00020 ATGGAGTCACTTCTTCTACTTTTGTGCCTAGCTCTTCCACTATTTCTTTTCTTCTTCTTCCAAAAGCACAGAGCCACAACACGTCCTCATGGTCCTAGAGGCCTTCCTATAATAGGGAATCTTCATCAGCTGCACAATCCTACCCTTCATCTGCAGCTATGGAAGTTCTCAAAAAAATATGGCCCCATGTTTTCACTTCAACTCGGTTTAAGGCCATGCCTTGTTGTCTCCTCCTCCACAATGGCTCAAGAGGTTCTGAAAATCCATGACCTTCACTTTTGTGGTAGACCATCCTTTCTCAGCCAAAAGAAACTGTTCTACAATAGGGTCGAGATAGCATTTTCCCCATACAATGATTCTTGGAGAGAAATAAAAAAAATATGCACAGTTCATGTCTTTAGCTTGAACCGTGTCTCAAGCTTCTCCTCTATACGGCAATTTGAGATCAATCAAGTGATCAGAAAGATATCATTGCAAGCTTCTTCTTCAAAAGTTACCAATTTGAGTGAGGTTGTGATGTCTCTGACTAACACTATAATTTGTAGAGTTTCTTTTGGGAGAAGCTGTGAAGAGGAAGGAAGAACCAAAAGTAGGTTCCTTAACCTGCTTAATGAATCTCAGGTCTTGTTGGGTACATTCTTTGTTTCTGATTATATTCCATTAATGGGGTGGATTGATAAACTCAGAGGATTGCATGCTCGTCTTGAAAGGAACTCCAAGGAGATGGATGCATTTTTGCAAGAAGTTGTCAACCAGCACCTTGATAAAAAATCAGATGAAGAGGATATCATTGATGTCTTGTTGAAGCTGAAGAAGCAGAATTCATTTTCATTTGATCTCACTTATGATCGGATCAAAGCTGTGCTCCTAGATATGCTTGTTGGAGGAACATATACAAGTGCTGCCACAGTAATTTCGGCTATGACCAAATTAATAGGAAACCCCAAAGCAATGATGAAAGTTCAAGCAGAAGTTAGAAATTCGTTTGGGAACAGAGGCTTTGTTGATGAAGATGAAATCCAGAAGCTTGGCTACCTTAAGGCAGTGATAAAAGAGACACTGAGATTATTCCCTCCTGTGCCACTACTTTTAGCAAGAGAAACGAATGAAGAATGCATTATAAAAGGGTATAAAATTCAAGCCAAGACATTGGTGTATGTGAATGCATGGGCCATTCAAAGAGACCCTGAAATTTGGAAAGACCCAGAAAAGTTCTATCCTGAGAGGTTCTTGGAGAGTTCAATTGATTTTAAGGGACAAGACTTTGAGCTGATTCCATTTGGTTCAGGAAGAAGAATTTGCCCAGGGTTACATTTTGGAGTTGCCAATGTGGAGATTATACTTGCAAACCTTCTTTATTGGTTTGATTGGGAAATGCCAACTGAGATAGAAAAAGAAGTCACAAACAGTCAAATGCAGCCAGGCATTGTCCAGATTGAGAAGGATTCTCTTTTTCTTGTGCCCAAGAAAATGGACGTATTAATTTTTTTTACCTGA 1497 0.3955 MESLLLLLCLALPLFLFFFFQKHRATTRPHGPRGLPIIGNLHQLHNPTLHLQLWKFSKKYGPMFSLQLGLRPCLVVSSSTMAQEVLKIHDLHFCGRPSFLSQKKLFYNRVEIAFSPYNDSWREIKKICTVHVFSLNRVSSFSSIRQFEINQVIRKISLQASSSKVTNLSEVVMSLTNTIICRVSFGRSCEEEGRTKSRFLNLLNESQVLLGTFFVSDYIPLMGWIDKLRGLHARLERNSKEMDAFLQEVVNQHLDKKSDEEDIIDVLLKLKKQNSFSFDLTYDRIKAVLLDMLVGGTYTSAATVISAMTKLIGNPKAMMKVQAEVRNSFGNRGFVDEDEIQKLGYLKAVIKETLRLFPPVPLLLARETNEECIIKGYKIQAKTLVYVNAWAIQRDPEIWKDPEKFYPERFLESSIDFKGQDFELIPFGSGRRICPGLHFGVANVEIILANLLYWFDWEMPTEIEKEVTNSQMQPGIVQIEKDSLFLVPKKMDVLIFFT 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2410g00020 498 PANTHER CYTOCHROME P450 71B11-RELATED 14 489 - -
Gabi2410g00020 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Gabi2410g00020 498 SUPERFAMILY Cytochrome P450 29 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 Gene3D Cytochrome P450 20 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 Pfam Cytochrome P450 29 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2410g00020 498 CDD CYP71-like 59 484 - -
Gabi2410g00020 498 FunFam Cytochrome P450 83B1 16 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2410g00020 Gabi-Chr2410 281113 287845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2410g00020 3 490 Cytochrome P450 AT4G31500 45.491 2.91e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2410g00020 - - gmx:100801312 613.224