Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2410g00019 ATGGCTCAAGAAGCGCCAAAATCGGCGCAAATAGCATTGTGTAATAACAAATCGGCTAAGCTTTCCAGAAACTACTTTCTTCTAATTCAATTCATTCATTATCCTTTTTCTGCCAATTCGTGTTCACAGTTAATATCTTCTCCACATGTTCCACGTTGGCTTCAAGTCCTCCTCACTGAGAAGTTCTACAACGCTTGCGTGATTCATGAAGGGGCAAAGAAGAATGAAAAGAACGTTTATTGCTTGGATTGTAGCATCAGTCTTTGCCCTCATTGTTTGTCCCCTCACCGTTCTCATAGACTCTTGCAGATTAGAAGATATGTGTATCACGATGTTATAAGGCTGGATGATGCTCAAAAGTTAGTTGACTGCACTTCGGTTCAATCCTACACAACCAACAGTGCAAAAGTGGTGTTTTTAAACCAAAGGCCACAGACAAGGAACTTCAGAGGCTCCAGCAATTTCTGCAACACCTGCGACAGAAGTCTGCAATACCCATACCAATTTTGCTCTCTTTCTTGCAAGATCAATTACCTCGTTGCAACAACAGGTAGTGTCTCTGGATACCTATTCGAGTGCAACTATCTGTCCTTACCCGAAACCGGGTTCGATGACTTTCTGATGAACCCCGGTTCGGTTCTCGACTCTGATATTGTGAGGAAGAAAAGGAGTGGCGGTTCGGCTTACCGACCGGCGTGTCGACCGGTTTGTGAAATTTCTGCGGGTTTGATGAACCGAAGAAAAGGGACCCCACAGAGGGCCCCACTGTACTGA 774 0.447 MAQEAPKSAQIALCNNKSAKLSRNYFLLIQFIHYPFSANSCSQLISSPHVPRWLQVLLTEKFYNACVIHEGAKKNEKNVYCLDCSISLCPHCLSPHRSHRLLQIRRYVYHDVIRLDDAQKLVDCTSVQSYTTNSAKVVFLNQRPQTRNFRGSSNFCNTCDRSLQYPYQFCSLSCKINYLVATTGSVSGYLFECNYLSLPETGFDDFLMNPGSVLDSDIVRKKRSGGSAYRPACRPVCEISAGLMNRRKGTPQRAPLY 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2410g00019 257 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 50 256 - -
Gabi2410g00019 257 ProSiteProfiles Zinc finger B-box type profile. 61 104 IPR000315 GO:0008270
Gabi2410g00019 257 CDD Bbox2 66 104 - -
Gabi2410g00019 257 Pfam B-box zinc finger 63 103 IPR000315 GO:0008270
Gabi2410g00019 257 Pfam PLATZ transcription factor 105 176 IPR006734 -
Gabi2410g00019 257 SUPERFAMILY B-box zinc-binding domain 64 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2410g00019 Gabi-Chr2410 272935 278799 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gabi2410g00019 PLATZ 2.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2410g00019 - - pvu:PHAVU_008G142900g 370.163