Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2410g00012 ATGAAGGCCATGCCCTTTCCTTTTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCTGCCACAGATTCATTATCACTGCTTTTGCATCAACAACAAAAGTGGACCAGAGACAAAGAGTATTGCTATGTGGGCACTGAGCCCACCTCTGTTCTTGACTCCAGAAGAAGCCCAAGTCCTCCTACTTCCTCCTCAACAATGTCCTCTTCTCTCGGTAGCAACAGCAGCGGCAAGGGTGGTGGTTGTGGCAGTGGTTCAGCCAACAACACCATTTGTGCAGCCCCAAATGTCTCAGAGAATCCACCTCATGAAGCCTTGGAAAACAGCACAGTAAAATGTGGTATGCGTATGGAGGACTGGGAGGGTCAAGATCAATCTATTCTGAGATTAATCATGGGTGATGTTGAAGACCCATCTGCAGGATTGAGCAAGCTCTTGCAAAGCAGTGGTTGTGGGTCTCAAAATGTTGATTTCAATGGAGGTTTTGGTGGTTTGGATCAAGGGTTGAATATGGAAAGTAATATTGACCCTTCTGTGCCTGGGAATTATCCTGGTTTCTCATTCATTGCTGAGAATATAGATGGCCACAATGCAAAGGCTGGTTCTGTCTCGGTTTCAGAATCTATCTTCTCTGCTTCTGGTAACAATCCTATGTTAATGTCATCATCTCCTGGTGTATTCAATTCTCAGCAGCACCACCACCACCACCAAGAGTTTGGAGTTGTAGATGAGAAACCTCAAGTTATCAATCCCCAGTTTGTGTTAAACCAGAATCAAGTTCAATTCTCTGAGAATCCCTTTTTCTTTGTGCCATTGAATTACCCTCAAATGCAAGAGCAACAAGTTTTCTCTCAGCAACAAGCAAAACGCCCTCTTTATGACACGGTTGGGCACAATCATCAGGTCCCAAGGCTACCCCTTTTGGATTCAGGGCAAGAGTTATTTGGTAGGAGGCAGCAAACACAGCTTCCATTGTTTCCTCATCATCTGCAACAACAGCAATCATTGGTTTTGCCATCTACAAAACAGCAGAAGGTGAGTTCCACCGGAGATGATGCAAGCCACCAGCTTCAGCAGAGTATATTTGACCAGCTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTATTGGTAAGCCTTTTCAAAGGGCTGCTTTCTACATGAAGGAGGCCTTGCAGTTACTGCTTCATCCAAACAATGAAAACTTTTTGGCTTTCTCACCCATTAGTTTCATATTCAAAATTGGGGCTTATAAATCATTTTCTGAGATATCACCTGTTCTTCAGTTTTCCAATTTTACATGTAATCAAGCCCTTATTGAAGCTGTGGAAAGGTTTGATCAAATTCATATTATTGATTTTGATATCGGGTTTGGAGTGCAATGGTCTTCTCTTATGCAAGAGCTTGCCTTGAGAAATAGTGGTGCACCTTCACTTAAAGTGACTGCTGTTGTATCACCCTCAACATGCGATGAGGTCGAGCTCAATTTTACCCGAGATCATTTGAATCAATATGCAAAAGACATCAACATGTCATTTGAGCTCCATGTGTTAAGCATTGAATCATTGAACTCTCCTTCTTGTCCCCTGCGTGGTCAGTTCTTTGATAATGAGGCAATTGCTGTGAATATGCCAGTTTCATGTTTCACAAATTATCCATCATTGGTTCCATCGGTCCTTCACTTTGTAAAGCAGCTTAGGCCAAAAGTTGTGGTGACTTTGGATAAAAATTGTGATCGAATTGATGTACCACTTCCCACGAACGTAGTCCATGTTCTTCAATGTTATTCAGCTTTGCTCGAATCACTGGATGCGGTAAATGTTAATCTAGATGTCCTCCAAAAGATTGAGAGGCATTTCATTCAACCTGCCATCAAGAAAATTATACTAGGTCATCAGCATTCACAGGAAAAATTACCTTCTTGGAGGAACCTGTTTTTTCAATCTGGTTTCTCTCCATTCACATTTAGTAACTTCACAGAAGTTCAAGCTGAGTGTTTAGCACAGAGGGCACCTGTTCGAGGATTTCAAGTGGAGAGAAAGCCCTCCTCTCTTGTTCTATGCTGGCAGAGGAAAGAACTTATCTCAGTTTCAACTTGGAGATGCTGA 2163 0.4286 MKAMPFPFEEFQGKGVLDFSSATDSLSLLLHQQQKWTRDKEYCYVGTEPTSVLDSRRSPSPPTSSSTMSSSLGSNSSGKGGGCGSGSANNTICAAPNVSENPPHEALENSTVKCGMRMEDWEGQDQSILRLIMGDVEDPSAGLSKLLQSSGCGSQNVDFNGGFGGLDQGLNMESNIDPSVPGNYPGFSFIAENIDGHNAKAGSVSVSESIFSASGNNPMLMSSSPGVFNSQQHHHHHQEFGVVDEKPQVINPQFVLNQNQVQFSENPFFFVPLNYPQMQEQQVFSQQQAKRPLYDTVGHNHQVPRLPLLDSGQELFGRRQQTQLPLFPHHLQQQQSLVLPSTKQQKVSSTGDDASHQLQQSIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALQLLLHPNNENFLAFSPISFIFKIGAYKSFSEISPVLQFSNFTCNQALIEAVERFDQIHIIDFDIGFGVQWSSLMQELALRNSGAPSLKVTAVVSPSTCDEVELNFTRDHLNQYAKDINMSFELHVLSIESLNSPSCPLRGQFFDNEAIAVNMPVSCFTNYPSLVPSVLHFVKQLRPKVVVTLDKNCDRIDVPLPTNVVHVLQCYSALLESLDAVNVNLDVLQKIERHFIQPAIKKIILGHQHSQEKLPSWRNLFFQSGFSPFTFSNFTEVQAECLAQRAPVRGFQVERKPSSLVLCWQRKELISVSTWRC 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2410g00012 720 MobiDBLite consensus disorder prediction 51 85 - -
Gabi2410g00012 720 MobiDBLite consensus disorder prediction 48 85 - -
Gabi2410g00012 720 Pfam GRAS domain family 364 719 IPR005202 -
Gabi2410g00012 720 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 323 715 IPR005202 -
Gabi2410g00012 720 ProSiteProfiles GRAS family profile. 353 719 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2410g00012 Gabi-Chr2410 126668 129541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2410g00012 362 720 GRAS Transcription Factor Family AT4G00150 54.696 4.76e-126 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi2410g00012 GRAS 2.4e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2410g00012 - - gmx:100801785 1076.62