Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2410g00010 ATGAAGGCCATGCCCTTTCCTTTTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTTTCTTCTGCATCAGATTCAATATCACTGCTTTTGCATCAACAACAAAAGTGGACAAGAGACAAAGAGTATTGCTATGTGGGCACTGAGCCCACCTCTGTTCTTGACTCTAGAAGAAGCCCAAACCCTTCTACTTCATCCTCCACCATGTCCTCTTCTCTTGGCAGCAATAGCACCGGCAAGGGTGGTGGTGGTGGTGGTTCAGCCAATAACACCACTTGTGCAGCCCCAACTGTTTCTGAGAACCCACCTCATGAAGCCTTGGAAACCCCCACAGATAAATGTGGTATGAGAATGGAGGAATGGGAGGGTCAAGATCAATCTATTCTGAGATTAATCATGGGTGATGTTGAAGACCCATCTGCAGGATTGAGCAAACTCTTCCAGAGCAGTGGCTGCGGTTCTCAAAATATTGATTTCAATGGAGGTTTTGGTGGTTTGGATCAAGGGTTGAATCTGGTAAGTATTATTGACCCTTCTGTGCCTGGGAATTACCCTGGTTTCCCTTTCATTGCTGAAAATATAGATAGCCACAATGCAAAGACTGGTTCTATCTCGGTTTCAGAATCATTTTTTCCTGCTTCTGGTAACAATAACAATCCTTTGTTGATGTCAACATCCCCGGGTGTGTTTAATTCTCATCATCATCATCATCATCATCATCAGCAGCAGCAGCAGCAGCAAGTGATTGGTGAAGTAGATGAGAAACCTCAAGTTATCAATCCTCAGTTTATGTTAAACCAGAATCAAGTTCAATTCTCAGAGAACCCTTCTTTCTTTGTGCCATTGAATTACCCTCAAATGCAAGAACAGCAAGCTTTCTCTCAGCAACAAGCAAAACGCCCTCCTTGTGACACAATTGGGCACAATTATCAGGTTCCAAGGTTACCCCTTTTGGATTCAGGGCAAGAGCTATTTGGTAGGAGGCAGCAAACACAGCTTCCATTGTTTCCTCATCATCTGCAACAACAGCAATCATTGGTTTTGCCATCATCAAAACAGCAGAAGGTGAGTTCCACCGGAGATGATGCAAACCACCAGCTTCAGCAGAATATCTTTGATCAGCTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCAAGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTACTGGTAAGCCTTTTCAGAGGGCTGCTTTTTACATGAAGGAGGCCTTGCAGTTATTGCTTCATTCAAACATTCACAATTTCAAAGCTTTCTCACCACTTAGTTTCATATTCAAAATTGGAGCTTATAAATCATTTTCTGAGATATCACCTGTTCTTCAGTTTGCCAATTTTACTTGTAATCAAGCCATCATTGAAGCTGTGGAAAGGTTTGATCGAATTCACATTATTGATTTTGATATCGGGTTTGGAGTGCAATGGTCTTCTTTTATGCAAGAGCTCGCCTTGAGAAATAGTGGTGCACCTTCACTTAAAGTTACTGCTGTTGTATCACCCTCCACTTTTGATGAGGTTGAGCTCAATGTTACACAAGAAAATTTGAATCAATACGCGAAAGAGATCAACATGTCGTTTGAGCTCAATGTTTTGAGCATTGAATCATTGAACTCTCCTTCTTGTGGTCAGTTCTTTGATAATGAGGCAATTGCAGTGAATATGCCAGTTTCTTGTTTCACAAATTATCCATCACTGTTTCCTTCAGTCCTTCGCTTTATAAAGCAGCTTAGGCCAAAAGTGGTGGTCACTTTGGATAGAAATTGTGATCGAATTGATGTACCATTCTCCACCAATGTTGTCCATGCTCTTCAATGTTACTCAGCCTTACTTGAATCATTGGATGCTGTGAATGTGAACCTAGATGTCCTCCAAAAGATTGAGAGGCATGTTGTTCAGCCAGCCATTAAGAAAATTATATTGGGTCACCACCATTCACAGGAAAAATTACCTCCTTGGAGGAACATGTTTCTTCAATATGGGTTCTCTCCATCCACATTTAGTAACTTCACAGAAGCTCAAGCTGAGTGTTTAGTGCAGAGGGCACCTGTGCGGGGATTTCAATTGGAGAGAAAGCACTCCTCTCTTGTTCTATGCTGGCAGAGGAAAGAACTCATCTCAGTTTCAACTTGGAGATGCTGA 2178 0.4242 MKAMPFPFEEFQGKGVLDFSSASDSISLLLHQQQKWTRDKEYCYVGTEPTSVLDSRRSPNPSTSSSTMSSSLGSNSTGKGGGGGGSANNTTCAAPTVSENPPHEALETPTDKCGMRMEEWEGQDQSILRLIMGDVEDPSAGLSKLFQSSGCGSQNIDFNGGFGGLDQGLNLVSIIDPSVPGNYPGFPFIAENIDSHNAKTGSISVSESFFPASGNNNNPLLMSTSPGVFNSHHHHHHHHQQQQQQQVIGEVDEKPQVINPQFMLNQNQVQFSENPSFFVPLNYPQMQEQQAFSQQQAKRPPCDTIGHNYQVPRLPLLDSGQELFGRRQQTQLPLFPHHLQQQQSLVLPSSKQQKVSSTGDDANHQLQQNIFDQLYKTAELIEAGNPVQAQGILARLNHQLSPTGKPFQRAAFYMKEALQLLLHSNIHNFKAFSPLSFIFKIGAYKSFSEISPVLQFANFTCNQAIIEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSGAPSLKVTAVVSPSTFDEVELNVTQENLNQYAKEINMSFELNVLSIESLNSPSCGQFFDNEAIAVNMPVSCFTNYPSLFPSVLRFIKQLRPKVVVTLDRNCDRIDVPFSTNVVHALQCYSALLESLDAVNVNLDVLQKIERHVVQPAIKKIILGHHHSQEKLPPWRNMFLQYGFSPSTFSNFTEAQAECLVQRAPVRGFQLERKHSSLVLCWQRKELISVSTWRC 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2410g00010 725 ProSiteProfiles GRAS family profile. 361 724 IPR005202 -
Gabi2410g00010 725 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 327 720 IPR005202 -
Gabi2410g00010 725 MobiDBLite consensus disorder prediction 221 248 - -
Gabi2410g00010 725 MobiDBLite consensus disorder prediction 51 97 - -
Gabi2410g00010 725 MobiDBLite consensus disorder prediction 50 110 - -
Gabi2410g00010 725 Pfam GRAS domain family 372 724 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2410g00010 Gabi-Chr2410 63771 66838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2410g00010 370 725 GRAS Transcription Factor Family AT4G00150 56.825 6.00e-133 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi2410g00010 GRAS 1.1e-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2410g00010 - - gmx:100801785 1012.29