Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2407g00027 ATGAAGAAGACCCTCGTCTACCACTCCGGACGCGCCCCCCGTGGCGCTCGTTCCAATTGGGTGATGCACGAATATAAGTTGGTTGATCAGGAATTGATCCAGGCTGGAGTAGCGCAGGATGCTTTTGTGCTGTGTAGGATTTTCGAGAAGAGTGGTGCTGGGCCCAAGAATGGGGAGAAGTATGGTGCCCCCTTGATTGAGGAGGAATGGGAAAACGATGATGTGCCGGCTGGTGATGATGAGTTTTTCAATGAAGTGTCTGCTGGTGATACTGGTGCTTTTGTTGAAACGGACGACCTTGAGCAGAAGCTTGATATTGATGCTACACTTGGAGGTGCTGATTTTACATCAAACTTCTACCACGGGGAGTGTAGTAGCTATCCTGAGCATTCCCAAGAATTCATAAGCGATCAGAAGCCATTGGCAGGCACTGTTGAAATTTCTGAGCCTCAAAATGATCAACCTTTCAATATGGCTGAGCAATATGGGGTGGACGCCAATTTAGCGAAAGATGGAGACAATGTTGAGTTGAGCCATAATGAGAATCCATTGAATTTCAATTACGCCGTTGATGATCTGGATCCATACTTCAATACCATTGACAATGGATTATTCCTGGAAACCAATGATCTTGGGAATCCGGGTGAGGGTAATTTGAATGAGGAAGACCCTTATGGTATTGGTATGCTAGATGAATATCTTACATACCCTGATGACGACATTTGCAAGTATATATCTTTTGATTCTCCTCCGAGCTTGGAGAGCGAAAACCCTATTTCTGACCAAGGACCACCTTTCATCCAGCAGAATGTGGAGGGAGAAACCAATAATATTTCCATGGCAAGCAAACATGATTTTGAAGCACAATCTAATGATGAAGCTTCTTTAAAGAAGAATCAGCAGGGTTCAAATTCGGTATCAGGAAATACAAATCCATTTGTGAAGCAGGCCCATAAATTGTTGGCCAGCATACCTGCTCCGCCTGCATTTGCTTCAGAGTTTCCTACTAAGGAGATTGCTCTTAGGCTTCATCCTGCAGCTCAGTCTTCCAATTCAGCTCATGTAACTACGGGCATGATGAGCATAACAGACATTACTTTTAGAGGCAATGCGATGGACTGGATGGTAGGCAAGAATGGAGGGTTTAACGCAATAATATCTACTGAGTTTTCTCAGCCTGATGTTAATTCTGCTGGTTTGATGCCTGTTTTTGGCTTGGTCTCTGGCAAGACCGCATTTGTGTTGTCACATGGCTGGATTTTCTTGATGTTTTTTTCGGTTATGATTCTTTCACTGAGTCTAAAGATTGGATGCTTCATGTATACTGGTAAATGA 1335 0.4382 MKKTLVYHSGRAPRGARSNWVMHEYKLVDQELIQAGVAQDAFVLCRIFEKSGAGPKNGEKYGAPLIEEEWENDDVPAGDDEFFNEVSAGDTGAFVETDDLEQKLDIDATLGGADFTSNFYHGECSSYPEHSQEFISDQKPLAGTVEISEPQNDQPFNMAEQYGVDANLAKDGDNVELSHNENPLNFNYAVDDLDPYFNTIDNGLFLETNDLGNPGEGNLNEEDPYGIGMLDEYLTYPDDDICKYISFDSPPSLESENPISDQGPPFIQQNVEGETNNISMASKHDFEAQSNDEASLKKNQQGSNSVSGNTNPFVKQAHKLLASIPAPPAFASEFPTKEIALRLHPAAQSSNSAHVTTGMMSITDITFRGNAMDWMVGKNGGFNAIISTEFSQPDVNSAGLMPVFGLVSGKTAFVLSHGWIFLMFFSVMILSLSLKIGCFMYTGK 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2407g00027 444 MobiDBLite consensus disorder prediction 293 311 - -
Gabi2407g00027 444 ProSiteProfiles NAC domain profile. 1 50 IPR003441 GO:0003677|GO:0006355
Gabi2407g00027 444 MobiDBLite consensus disorder prediction 250 269 - -
Gabi2407g00027 444 MobiDBLite consensus disorder prediction 286 311 - -
Gabi2407g00027 444 SUPERFAMILY NAC domain 1 50 IPR036093 GO:0003677|GO:0006355
Gabi2407g00027 444 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 206 - -
Gabi2407g00027 444 MobiDBLite consensus disorder prediction 246 269 - -
Gabi2407g00027 444 Gene3D NAC domain 1 53 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2407g00027 Gabi-Chr2407 245641 248666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2407g00027 1 436 NAC Transcription Factor Family AT5G04410 35.113 4.20e-66 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2407g00027 - - aprc:113871167 558.525