Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2405g00005 ATGAGAGTCAAGATCACATGTTATGCATCTGTATGGAAGAATTCAACCATTTTGACTTCGAGTTTGGGGAAAGCATTGGTCCCCTCTGTGGAAACTATTAGAAAAATTATGTACAAAGAGAAGAATTTTATTCAAGTTTTGCACAGATGCGGCTGGATACTCCCAAAGTACCAAAAATTTGTTGGCAATGTTACCTTGTTAGAGAGTTATGGCATTGTTGGATCTCAGCTTTCTATGTTACTCAAACGACAGTCAAGGCTTTTCGTTGCACCACAGTCTACTCTTAAAAATTATATTTTGCGTGCTGTAGATATGGGTTTCAATGAAAATTCAAGAATGTTGGTCCATGCACTCCATACAATAAGTGGTTTGAGCAGTAAAACATTTAGGAGAAAGCTGGAGCTAATTCAGTCTTTTGGGTTCTCTAAAGATGAGAGCCTGTATATGTTCAAAAGATGTCCAAATTTGCTTAGAACATCAGAGAAGAAATTAAAGGTTGGAATGGAATTCTTCTTGCATACAGTTATGCTGCCAAAGTCGGCCTTGGTTCATCGGCCTATGATTTTAATGTATAGCATCCAGGATAGGGTGGTTCCTCGGTATAAAGTTTTGCAGCTCTTAATATCAAAAAATCTATGTAAGAAGGTCCCAAGTTATGTTTATTTGTTATGTTTGTCTGAGGAGATGTTCTTGGACAAGTATATATCACGGTTCAGAAAAAATGCTGAGTCATTACTGGTAGCTTATAAGGGTCATCATCTGGAAGCATAA 771 0.3722 MRVKITCYASVWKNSTILTSSLGKALVPSVETIRKIMYKEKNFIQVLHRCGWILPKYQKFVGNVTLLESYGIVGSQLSMLLKRQSRLFVAPQSTLKNYILRAVDMGFNENSRMLVHALHTISGLSSKTFRRKLELIQSFGFSKDESLYMFKRCPNLLRTSEKKLKVGMEFFLHTVMLPKSALVHRPMILMYSIQDRVVPRYKVLQLLISKNLCKKVPSYVYLLCLSEEMFLDKYISRFRKNAESLLVAYKGHHLEA 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2405g00005 256 PANTHER CGI-12 PROTEIN-RELATED 13 237 IPR003690 GO:0003690|GO:0006355
Gabi2405g00005 256 Gene3D Transcription termination factor 3, mitochondrial 6 241 IPR038538 -
Gabi2405g00005 256 Pfam mTERF 13 230 IPR003690 GO:0003690|GO:0006355
Gabi2405g00005 256 SMART mt_12 179 211 IPR003690 GO:0003690|GO:0006355
Gabi2405g00005 256 SMART mt_12 78 108 IPR003690 GO:0003690|GO:0006355
Gabi2405g00005 256 SMART mt_12 112 142 IPR003690 GO:0003690|GO:0006355
Gabi2405g00005 256 SMART mt_12 147 178 IPR003690 GO:0003690|GO:0006355
Gabi2405g00005 256 SMART mt_12 8 39 IPR003690 GO:0003690|GO:0006355
Gabi2405g00005 256 FunFam Mitochondrial transcription termination factor-like 22 242 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi2405g00005 mTERF 4.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2405g00005 K15031 - vvi:100268158 268.47