Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2404g00001 ATGGAGGACCAAAATGTTAGTGGTAAGTTAAGCAAGGGGCTTCGCAAGTTGAAACCTTACCTTGCTATGGTGTCCCTTCAATTTGGCTACTCTGGTATGTATGTTATCACTATGGTTTCTTTCAAGCATGGCATGAGCCATTGGATCCTCTCAGTGTATCGTCATGTAGTTGCGGCTCTTTTAATAACCCCTTTTGCGCTTGTTCTTGAAAGAAAAACAAGGCCAAAGATGACTCTCCCCATCTTCCTGAGGATAGTGGCGCTTGCTTTCCTTGAGCCAGTGCTAGATCAGAACTTGTACAACATGGGGATGAAGATGACCTCAACAACGTTTGCATCTGCAACCATAAATGTCCTCCCAGCTATTACTTTTGTAATGGCACTCATTTTCAGGTTAGAGACAGTGAACTTGAGAAAATTTCACAGCTTAGCCAAGGTCATTGGAACGGTTATAACAGTTTCAGGAGCTATGGTTATGACTTTGTACAAAGGCCCTGCCTTTCAGATCATAAAGGGAGGAGGAGCCATCAACCACCATGGGACCGCCGCCACCGAGCCCTCCGACCAGCATTGGGTGGTGGGCACACTAATGCTCATAGCAAGTTGTGGTGGTTGGGCTGGTTTCTTCATTTTGCAATCATTCACTTTGAAGATGTACCCAGCAGAGCTTTCACTCACAGCATGGATTTGCTTGTTGGGTATTGTTGAGGGTTCAATTGCATCACTTATATTTGAACGGGACTTCAGTGTGTGGGCCATAGGCTGGGACTCAAGGCTTCTTGCTTGCGTTTATTCTGGGGTGATATGCTCTGGAATGGCTTATTATGTACAAGGGGTTGTGACTAGGGAACGTGGACCAGTGTTTGTGACTTCTTTTAGTCCTCTATGTATGATTATCACAGCTGCATTGGGTTCCCTTGTCTTAGCTGAGCAAGTTCATCTAGGAAGTATATTTGGAGCTATTCTCATTGTCTCAGGGCTTTACACTGTGGTATGGGGCAAAAGTAAAGACTCTCCAAACACAACAGATGTAAGAAAGGGTGAAGTCCAAGAATTGCCAATTAAGGAAGGTACAAAAACAGTTTCAGACATTTTTGATGGCATTGAGATCAATGTTCCTGCTGAGATGTTGAAGAAAGGGGCAGGGAAAAGTGTTCCACCAGCAACAAGAACATGA 1176 0.4447 MEDQNVSGKLSKGLRKLKPYLAMVSLQFGYSGMYVITMVSFKHGMSHWILSVYRHVVAALLITPFALVLERKTRPKMTLPIFLRIVALAFLEPVLDQNLYNMGMKMTSTTFASATINVLPAITFVMALIFRLETVNLRKFHSLAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAINHHGTAATEPSDQHWVVGTLMLIASCGGWAGFFILQSFTLKMYPAELSLTAWICLLGIVEGSIASLIFERDFSVWAIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVSGLYTVVWGKSKDSPNTTDVRKGEVQELPIKEGTKTVSDIFDGIEINVPAEMLKKGAGKSVPPATRT 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2404g00001 391 PANTHER WAT1-RELATED PROTEIN 19 338 IPR030184 GO:0016020|GO:0022857
Gabi2404g00001 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
Gabi2404g00001 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Gabi2404g00001 391 Pfam EamA-like transporter family 31 152 IPR000620 GO:0016020
Gabi2404g00001 391 Pfam EamA-like transporter family 194 331 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2404g00001 Gabi-Chr2404 21050 25482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2404g00001 14 371 Nodulin-like Gene Family AT4G08300 64.481 3.24e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2404g00001 - - gmx:100783910 691.034