Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2401g00026 ATGGCAATTGGGTTCATGGAGGTGCTGCTGGTGAAAGCAAAGGGTCTTCAAGAAACTGATATATTTGAGGGAGGCAGAAATCCTGTATGGAATGAAAAATTTGTATTCAGAGTGGAATACCCTGGATCAGGTGATCACTACAAGCTCAACCTTAAAATCATGGACAAGGACGTTTTTTCTGCAGATGACTTTGTTGGCCAGGCCATAATCCATGTGAAGGATTTATTGGTAGAAGGAGCAGAGAATGGATCAGCTGAGCTTCATCCTCGCAAGTATGTTGTTGTTCGAGCTGACCAGTCTTATTGTGGTGAAATTGAAGTTGGTATAACTTTCACCCGAAAGGAAGAGGAATATATTGACAATGACATTGGAGGATGGAAGGAAAGTGACCATTAG 396 0.4192 MAIGFMEVLLVKAKGLQETDIFEGGRNPVWNEKFVFRVEYPGSGDHYKLNLKIMDKDVFSADDFVGQAIIHVKDLLVEGAENGSAELHPRKYVVVRADQSYCGEIEVGITFTRKEEEYIDNDIGGWKESDH 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2401g00026 131 PANTHER C2 DOMAIN-CONTAINING 23 116 - -
Gabi2401g00026 131 ProSiteProfiles C2 domain profile. 1 85 IPR000008 -
Gabi2401g00026 131 Pfam C2 domain 12 82 IPR000008 -
Gabi2401g00026 131 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 115 IPR035892 -
Gabi2401g00026 131 Gene3D C2 domain 5 127 IPR035892 -
Gabi2401g00026 131 SMART C2_3c 5 84 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2401g00026 Gabi-Chr2401 300899 303213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2401g00026 8 87 C2H2 Transcription Factor Family AT4G21160 28.750 5.62e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2401g00026 - - gmx:100500493 229.565