Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2401g00011 ATGTGTGATGCAATTGATTTGAATAGGGTTGGAGGAGTCATCAAGACCATAGTGAGGAAAAGCAAGTCAGATGCTGTGGCTCCAACAGAAGATTTTCGAGTTGTTGATGTACATTATATGAAGGCATGCTTGCTGATACTAGAGAATTATTTGACACTACACGAAGATAACAATATCTTCACTTTTGAGCTTGGAAAGGGTAATGTTATCAAGGCTTGGGACATTGCAGTGAGAACCATGAAGGTCAATGAAATTGTCAAAATAAAATGCAAGCCGGAATATGCATATGGTAGTGCAGGGTTTCCACCAGATATTATCCCAGATGCGACACTTGTTTTTGAAGTTCCATGTAGTTCGATAGACCCTCCATTCTCCTAA 378 0.3968 MCDAIDLNRVGGVIKTIVRKSKSDAVAPTEDFRVVDVHYMKACLLILENYLTLHEDNNIFTFELGKGNVIKAWDIAVRTMKVNEIVKIKCKPEYAYGSAGFPPDIIPDATLVFEVPCSSIDPPFS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2401g00011 125 Gene3D - 2 121 IPR046357 GO:0003755
Gabi2401g00011 125 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 11 116 - -
Gabi2401g00011 125 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Gabi2401g00011 125 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 55 115 IPR001179 GO:0003755
Gabi2401g00011 125 SUPERFAMILY FKBP-like 48 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2401g00011 Gabi-Chr2401 130236 132605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2401g00011 35 115 Calmodulin-binding Proteins AT5G48570 43.210 4.98e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2401g00011 K01802 - gmx:100500018 162.54