Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2396g00014 ATGGAGACAAATGTCATTTTGGACAACAACTTGGTGATAGATTCTAACTCTCTTGATATGCCACAATCTTTTAGTGCTGAAGAAGTCATTGTTGAGCCTTATGTTGGAATGGAATTTGATTCATTGAAAAAAGTTGAACATTTTTATACATTATTTGCCAAAGCAAAAGGATTTGGGATTCGTACCCGCTCTAGTAAAAAAAAATATTGCATTTTTGTATGTGTGAGAGAAGGTGAAAATAAGGTGAAAAGTGATAATATAGTAGAAGTTAAGAAAAAAACTTCAACCATACGCTCAGGATGTCGAGCATCACTGTGTGTATCAAAGGATAAGAATAGAGAGGTATGGGTTATAAAATCTTTTGACAACAACCATAATCATGTCATGGCCAGTCCTAAGAGTGTGTCTTATTTGAGGTGTCATAAAAAAATGAACGGTGCTACAAAAAATCTTGTTGAAAAGTTCAATGAAGAAGGCTTACCGACTGGAAAGGTTGCTGCAATGTTTAGTGGTAGTGATTTAGCTTTTTCTAATAGGGATTGTTGGAACCATTTGAGAAATCTTAGGAGAAAGAACTTGGATGTTGGAGATGCACAAGCTGTTTTCAATTACTGTAAACAAAAGCAAGCTCAAAACTCTAACTTTTTCTATGCAATACAATGTGATGATGATGACAGAATGATAAACTTTTTTTGGGTGGATTCTAGATCAAGGTTTGCTTATCAACAATTTGGAGATGTTATTACTTTTGATACAACATATAGAACCAACAAATATAGCATGCCATTTGCCCCATTCACGGGATTGAACCATCATCTTCAATCAATTTTATTCGGTTGTGCATTATTACAAGATGAATCTGAAAAAACTTTTGTATGGTTATTTGAAACTTGGCTTGAGGCAATGAATGGAAAGAAGCCTATTTCTATGATAACTGATCAAGATTTAGCTATTGGAGCAGCTGTTGCCAAGGTATTTCCAGAGACACGTCATCGTCTATGCTTGTGGCACATCAGAAAGAAGTTTCCTGAAAAGCTTGCACATATATATCACAAAAATTCTACATTCAAGCGTGAACTGAAGAGGTGCATTCGAGAATCATCAACTATCAAGGATTTTGAAGATGATTGGAAGCGCATAATGTTTGAGTATAACTTGCAGGAAAATGGTTGGCTTCAAAGGTTATTTGATATTAGAGAGTCATGGATACCAGTTTATAATAGGAACACTTTTTTTGCCGGTATGAATACTACACAACGGAGTGAGAGCATTAATTCTTTTTTTGACTCCTTTGTTAATTCAACCACAACACTACAAGACTTTGTGGTAAAATTTGAGAAGGCCATTAACAATCGATATGAGGCTGAAAAAAGAGAAGATTTTGACTCACGACATAAGTCACGCACTTTGACTATTGGCTCAAAAATTGAAGAACATGCTGCCTCAATTTATACAAGAAATGTGTTTGTTAAGTTTTATAATGAGCTTGCAAGTGTTAGCCATTTTACAAAGGAGAAGATTGAGAAAAACGATTCACATTGTAAGTATCGGGTATCTAATTGTTTTGATACTCGAGATTGTTCTATAGTTGATATAAATTTGGAATCAAAGAATGCTACATGTGGCTGTCATCTTTTTGAATTTATGGGAATACTATGTAGGCACATTTTGGTGATTTTTCAAGCAAAAAACATTATTCAAATTCCTAGTCAGTACATATTGCAGCGTTGGACAAAAGAGGCCAACAAATGTATAGAGTCGTGTGACATTGAAAATTGGAATCATGAATCAAATGTTTTGAGAAGTATGCATGTGCAACGTCAATTTGACAAGTTTTCTGATTTGGCTAAAAGATCTGAAGATGCATACAAGTTTATTATATCAGAACTTGATCGCATTTACAATATGGCCAATACAATGGGAATGGAAATTCTAGATGTCAATGAAGATCCTATAGAGTTAAATCAACAGAATTTGACATGTGACACAACAAATGATGTTTCAGATTTCAATATTAAAGACCCATATGTTTCACATACAAAAGGAAGAAGAAGAAAGGATTCTGACAAAGTCCCTCTGACAGGGAGGTTTAAGAGTGGTCTTGAATTATCGATGAACAAGACATTGCTGCTATACTAG 2139 0.3446 METNVILDNNLVIDSNSLDMPQSFSAEEVIVEPYVGMEFDSLKKVEHFYTLFAKAKGFGIRTRSSKKKYCIFVCVREGENKVKSDNIVEVKKKTSTIRSGCRASLCVSKDKNREVWVIKSFDNNHNHVMASPKSVSYLRCHKKMNGATKNLVEKFNEEGLPTGKVAAMFSGSDLAFSNRDCWNHLRNLRRKNLDVGDAQAVFNYCKQKQAQNSNFFYAIQCDDDDRMINFFWVDSRSRFAYQQFGDVITFDTTYRTNKYSMPFAPFTGLNHHLQSILFGCALLQDESEKTFVWLFETWLEAMNGKKPISMITDQDLAIGAAVAKVFPETRHRLCLWHIRKKFPEKLAHIYHKNSTFKRELKRCIRESSTIKDFEDDWKRIMFEYNLQENGWLQRLFDIRESWIPVYNRNTFFAGMNTTQRSESINSFFDSFVNSTTTLQDFVVKFEKAINNRYEAEKREDFDSRHKSRTLTIGSKIEEHAASIYTRNVFVKFYNELASVSHFTKEKIEKNDSHCKYRVSNCFDTRDCSIVDINLESKNATCGCHLFEFMGILCRHILVIFQAKNIIQIPSQYILQRWTKEANKCIESCDIENWNHESNVLRSMHVQRQFDKFSDLAKRSEDAYKFIISELDRIYNMANTMGMEILDVNEDPIELNQQNLTCDTTNDVSDFNIKDPYVSHTKGRRRKDSDKVPLTGRFKSGLELSMNKTLLLY 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2396g00014 712 ProSiteProfiles Zinc finger SWIM-type profile. 530 564 IPR007527 GO:0008270
Gabi2396g00014 712 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 635 IPR031052 GO:0006355
Gabi2396g00014 712 SMART 26again6 539 566 IPR006564 GO:0008270
Gabi2396g00014 712 Pfam MULE transposase domain 247 341 IPR018289 -
Gabi2396g00014 712 Pfam FAR1 DNA-binding domain 48 129 IPR004330 -
Gabi2396g00014 712 Pfam SWIM zinc finger 537 564 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2396g00014 Gabi-Chr2396 194979 197117 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi2396g00014 MULE 1.1e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2396g00014 - - vvo:131633311 1051.97