Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2396g00002 ATGGGGATTCAGACAATGGGTTCTCAAGGTAATGGGCAACAGTCTCATTTACAGCCTTCTTCGTTGTCTAGGCAAAACTCTTGGTATAGTCTCACTCTTGATGAGGTTAGGAGTCAATTAGGAGACATGGGGAAGTCATTGGGGAGCATGAACCTAGATGAGCTTCTTCAAAATGTATGGACTGCTGAAGCTAATAATTCTGTTATAGGCTTAGACAATGAAAACATATTGCGGTCATCGTCTTCTCTTCAACGTCAGGCGAGCCTGACATTGGCTCGTGCTTTGAGTGGGAAGACAGTTGATGATGTATGGAGAGAAATTCAACAAGGTCAGAAGAAAAGGTATGGAGAAGATGTGAAAAGTCAGGATAGAGAAATGACTCTCGGTGAAACCACTTTAGAGGATTTCTTGGTGCAAGCAGGGCTTTTTGCTGAAGCTTTTATAAGTCCGGCCAGGGGGTTGGATACAATGGATTCCTCCACTTCTCAGAGTTTTCAACATAAAGCAGGCTTGTCATCCTCCCCTTCAATTGGGAGTTTATCAGACACAAGACCAGGCCGGAAAAGGTACGGTCCAGATGTGTATGAGAAAACTCTGGAAAGGAGGCTGACGAGGAAAATCAAGAATAGGGAATCCGCTGCCCGCTCACGGGCACGAAAACAGGCTTACCATAATGAACTGGTTAGCAAGGTTTCCCGTCTAGAAGAAGCAAATGTAAAGCTCAAGAAAGAGAAGGAATTTGAGCAGAGGTTACCGTCTGAACCATTGCCTGAACCAAAATATCAGCTTCGAAGAATAAATTCTGCCTCTTTCTGA 816 0.4424 MGIQTMGSQGNGQQSHLQPSSLSRQNSWYSLTLDEVRSQLGDMGKSLGSMNLDELLQNVWTAEANNSVIGLDNENILRSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGEDVKSQDREMTLGETTLEDFLVQAGLFAEAFISPARGLDTMDSSTSQSFQHKAGLSSSPSIGSLSDTRPGRKRYGPDVYEKTLERRLTRKIKNRESAARSRARKQAYHNELVSKVSRLEEANVKLKKEKEFEQRLPSEPLPEPKYQLRRINSASF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2396g00002 271 SMART brlzneu 197 269 IPR004827 GO:0003700|GO:0006355
Gabi2396g00002 271 MobiDBLite consensus disorder prediction 156 181 - -
Gabi2396g00002 271 MobiDBLite consensus disorder prediction 156 193 - -
Gabi2396g00002 271 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 244 IPR004827 GO:0003700|GO:0006355
Gabi2396g00002 271 MobiDBLite consensus disorder prediction 245 271 - -
Gabi2396g00002 271 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 199 251 - -
Gabi2396g00002 271 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 22 268 IPR043452 GO:0003700|GO:0045893
Gabi2396g00002 271 CDD bZIP_plant_BZIP46 201 250 - -
Gabi2396g00002 271 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 219 IPR004827 GO:0003700|GO:0006355
Gabi2396g00002 271 Gene3D - 199 251 - -
Gabi2396g00002 271 MobiDBLite consensus disorder prediction 1 21 - -
Gabi2396g00002 271 Pfam bZIP transcription factor 201 245 IPR004827 GO:0003700|GO:0006355
Gabi2396g00002 271 SUPERFAMILY Leucine zipper domain 201 249 IPR046347 GO:0003700|GO:0006355
Gabi2396g00002 271 Coils Coil 224 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2396g00002 Gabi-Chr2396 32165 37214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2396g00002 21 271 bZIP Transcription Factor Family AT3G56850 47.902 1.26e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi2396g00002 bZIP_1 5.4e-10 CL0018