Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2394g00026 ATGCCACGAAGGCTGCGACGCTCGCCCATAAACCCCTCATCAGCACACCGTAGCCCAATTCGAAGTTCAGAATCCTCGTACAGAAAAGAAGAACAACGAAGGTCAGAGAAACTGAAGAAGAGAAAGAGAGGAGACATGGGTGTTGATTATTACAAGATCTTACAGGTTGATAGGAATGCCAAAGACGATGACTTGAAGAAGGCTTACAGAAAGCTCGCCATGAAATATCACCCAGATAAGAACCCAAACAACAAAAAAGATGCTGAATCGAAATTCAAAGAAATCTCAGAAGCCTACGAGGTGCTGAGTGATCCTCAGAAGAGGGCTGTCTATGATAAATATGGGGAAGAGGGTCTGAAGGGTCAGGTGCCACCTCCTGATGCTACTTTTGGTGGTGCTAATGGTGGAAGTAGAACCACTTTCTATTCCACCGGAGACATTCCGACGTCGTTTAGGTTCAATCCGCGGAACGCTGATGACATTTTTGCTGAGTTTTTTGGGTCCTCGAGCCCGTTTGGGGGCATGGGAAGAAGTAGTGGTGGTGGTGGTGGTGGCGGCGGCGGCGGCTTTGGAATGAGATCGAGGTTCTCTAATGGGATGTTTGATGATGATATGTTTGCATCTTTTGGGGAAGGAGGAGGAGTTCATGTGAGTCAAAGTGCCCCTCGTAAGGCTCCTCCCATTGAGAACAGGTTGCCTTGCTCTCTCGAAGATATTTATAAAGGGACCACTAAGAAGATGAAGATTTCTAGAGAAGTTGTTGATGCCACTGGCAAAACCATGCAGGTGGAGGAGATCTTGCCGATTAATGTCAAGCCTGGTTGGAAGAAGGGGACAAAGATCACCTTCGCAGAGAAGGGAAACGAACAGCCAAATGTGACTCCTGCAGACCTTGTTTTCATTATCGATGAAAAACCGCACAGTGTCTTTACCCGTGATGGTAATGATCTGATTGTAACCCAGAAGATTTCTCTTGCAGAAGCCTTAACTGGTTACACAGTGAACCTCACTACATTGGATGGTAGAAACTTATCCATACCAATCAACAATGTTATTCCTCCTGATTATGAGGAGGTTGTTCCAAGAGAAGGAATGCCACTCCCAAGGGATCCAACAATGAAGGGTAACTTGAGGATAAAGTTCAACATCAGATTCCCAACCAGGCTCAATGCAGACCAGAAGGCAGGAATCAAGAAACTCTTGGGATCCTGA 1212 0.462 MPRRLRRSPINPSSAHRSPIRSSESSYRKEEQRRSEKLKKRKRGDMGVDYYKILQVDRNAKDDDLKKAYRKLAMKYHPDKNPNNKKDAESKFKEISEAYEVLSDPQKRAVYDKYGEEGLKGQVPPPDATFGGANGGSRTTFYSTGDIPTSFRFNPRNADDIFAEFFGSSSPFGGMGRSSGGGGGGGGGGFGMRSRFSNGMFDDDMFASFGEGGGVHVSQSAPRKAPPIENRLPCSLEDIYKGTTKKMKISREVVDATGKTMQVEEILPINVKPGWKKGTKITFAEKGNEQPNVTPADLVFIIDEKPHSVFTRDGNDLIVTQKISLAEALTGYTVNLTTLDGRNLSIPINNVIPPDYEEVVPREGMPLPRDPTMKGNLRIKFNIRFPTRLNADQKAGIKKLLGS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2394g00026 403 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 46 401 - -
Gabi2394g00026 403 SMART dnaj_3 48 107 IPR001623 -
Gabi2394g00026 403 Pfam DnaJ C terminal domain 228 386 IPR002939 -
Gabi2394g00026 403 MobiDBLite consensus disorder prediction 22 44 - -
Gabi2394g00026 403 ProSiteProfiles dnaJ domain profile. 49 115 IPR001623 -
Gabi2394g00026 403 SUPERFAMILY HSP40/DnaJ peptide-binding domain 222 318 IPR008971 GO:0006457|GO:0051082
Gabi2394g00026 403 MobiDBLite consensus disorder prediction 1 44 - -
Gabi2394g00026 403 FunFam DnaJ subfamily B member 13 307 387 - -
Gabi2394g00026 403 Gene3D - 227 305 - -
Gabi2394g00026 403 SUPERFAMILY HSP40/DnaJ peptide-binding domain 309 395 IPR008971 GO:0006457|GO:0051082
Gabi2394g00026 403 SUPERFAMILY Chaperone J-domain 46 120 IPR036869 -
Gabi2394g00026 403 Gene3D DnaJ domain 47 179 IPR036869 -
Gabi2394g00026 403 Gene3D - 307 387 - -
Gabi2394g00026 403 ProSitePatterns Nt-dnaJ domain signature. 92 111 IPR018253 -
Gabi2394g00026 403 PRINTS DnaJ domain signature 69 84 IPR001623 -
Gabi2394g00026 403 PRINTS DnaJ domain signature 107 126 IPR001623 -
Gabi2394g00026 403 PRINTS DnaJ domain signature 87 107 IPR001623 -
Gabi2394g00026 403 PRINTS DnaJ domain signature 51 69 IPR001623 -
Gabi2394g00026 403 CDD DnaJ 49 104 IPR001623 -
Gabi2394g00026 403 FunFam Dnaj homolog subfamily b member 224 305 - -
Gabi2394g00026 403 Pfam DnaJ domain 49 112 IPR001623 -
Gabi2394g00026 403 CDD DnaJ_C 226 389 - -
Gabi2394g00026 403 FunFam DnaJ subfamily B member 13 48 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2394g00026 Gabi-Chr2394 203406 209101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2394g00026 50 114 C2H2 Transcription Factor Family AT1G74250 37.681 1.28e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2394g00026 K09510 - gmx:100778672 568.54