Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2394g00024 ATGAGGGAGGATAAGAAGGAAATGACTCAGTGCAGTTACCCTGAAAACAATCATAGCATCATTGTGGAGAGGCACAAAGACAGCTTAATCAGAACATGTCCCACATGTGGTCATCATATCAAAAACCAAGAGCAGGCTGCTGGAATTCATGACTTACCTGGACTACCTGCTGGAGTGAAGTTTGACCCTACTGATCAAGAGATTCTTGAACATTTGGAAGCCAAGGTGCGCTCTGATATTCACAAGCTTCATCCATTAATTGATGAGTTCATCCCTACACTTGAAGGCGAGAATGGAATCTGCTGTACCCATCCAGAGAAGTTGCCAGGAGTTAGCAAGGATGGCCTGATCCGACATTTCTTCCACCGGCCTTCCAAAGCATACACGACAGGAACAAGGAAAAGGAGAAAGGTGCACACTGATGCAGATGGCAGTGAGACCCGGTGGCACAAAACAGGTAAGACTAGGCCAATCTATATCAGTGGCAAGTTGAAAGGGTACAAGAAAATTCTTGTGCTTTACACTAACTACAAAAAGCAAAGAAAACCGGAGAAAACAAATTGGGTCATGCATCAGTACCACCTTGGCAATAATGAAGAGGAGAAGGAAGGGGAGTTTGTAGTCTCCAAAGTTTTCTATCAAACACAACCTAGACAATGTGGTTCACTCATGAAAGATTCATTTCCTGCAAAACCAAGTGGCCAAGGCATGCACGAGGTAACTAATCATAAAAACAGTGGGTTTGTCGAGTACTACAATACTTCTTTCATACCCTTTGATCAAGGGGACCAACATAGATCTAACAGTACTCAAATTTCCCATTTTTCTGTCCATGATGGTGCTTCTTTCATTCCTTAA 858 0.4301 MREDKKEMTQCSYPENNHSIIVERHKDSLIRTCPTCGHHIKNQEQAAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICCTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKTGKTRPIYISGKLKGYKKILVLYTNYKKQRKPEKTNWVMHQYHLGNNEEEKEGEFVVSKVFYQTQPRQCGSLMKDSFPAKPSGQGMHEVTNHKNSGFVEYYNTSFIPFDQGDQHRSNSTQISHFSVHDGASFIP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2394g00024 285 SUPERFAMILY NAC domain 50 214 IPR036093 GO:0003677|GO:0006355
Gabi2394g00024 285 Gene3D NAC domain 64 218 IPR036093 GO:0003677|GO:0006355
Gabi2394g00024 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 25 249 IPR044799 GO:0003700
Gabi2394g00024 285 MobiDBLite consensus disorder prediction 134 149 - -
Gabi2394g00024 285 MobiDBLite consensus disorder prediction 128 149 - -
Gabi2394g00024 285 Pfam No apical meristem (NAM) protein 56 195 IPR003441 GO:0003677|GO:0006355
Gabi2394g00024 285 FunFam NAC domain-containing protein 73 64 218 - -
Gabi2394g00024 285 ProSiteProfiles NAC domain profile. 55 214 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2394g00024 Gabi-Chr2394 189370 191112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2394g00024 31 231 NAC Transcription Factor Family AT4G28500 79.208 4.65e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi2394g00024 NAM 3.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2394g00024 - - gmx:100791648 550.436