Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2393g00024 ATGGGAGCCATCCGAGTCATCTCCACCACTACAATTCAGGCTCCGAGTCACAACAATGGTGACTCCCCTCAGATAATCAATTTAACCCCATGTGATCTCCAGTTCCTCCCAATAGAAACCATCCAAAAAGGGCTTCTTTTTCACAACCCCATCAACGCACAAGACATACAAATCCAAATCCAACAGCTGAAACACTCTTTTTCCTCCACTCTTGCTTTCTTTCCACCCCTCGCAGGCCGTCTCGCCATTGTCGAACATCACGACAACACTTCAACCTCTCACATCGTGTGCAACAATGCAGGAGCACTTTTTGTTCACGCCGTAGCAGACAACACTAGTGTTTCTGACATCCTTAAACCAAACTACGTTCCTCCCGTTGTCCACTCCTTCTTTCCGCTCAACGGAGTGAAAAACTATGAAGGAACATCACAGCCTTTGCTAGCAGTGCAAGTCACCGAGCTGGTTGACGGCATCTTCGTTGGCTGTACAATCAACCACGTGGTCGCTGACGGAAAGTCGTTTTGGCTTTTCGTCAATTCATGGGCTGAAATCTCACGTGGTTACCTTAAAGTATCAAAACTCCCAGCACTTGAACGTTGGTTTCTTGATGGCACTGACTGTCCCATAAGATTTCCATTCACAAAACAAGAAGAGAAGCAACACCTTGAATTCTTCAACCCACAGTCACCACCTGAGAGGATCTTCCATTTCACAAAGGAAAAAATAGCGCAACTCAAAGCAAAAGCCAATGCAGAGGCCAGCACAAACAAAATATCTTCTCTGCAAGCTCTTTTAACTCACCTTTGGCGCTCTGTTATCCGTTGTCAACGTCATGACCCACAAGAAGAGATCCATTATTTCATGGCGATTGGGTTTAGATCCAGGATGGTTCCACCGTTGCCAGAGGATTATTTTGGAAACGCTGCTACGTTTGGTGGTGTCACCATGAAAGTAAGGGATCTGCTTGAGGGTGGACTCGGCAAGTGTTCTTGGGAGATGAACAAAATGATAGCTTCATACACTGATGAGAAGGTGAAGAGCCACTATGAGTCTTGGGTTAAAACCCCAAGGCTGCTTTGGCTGGGTAGCGTGGCCAGTAGTAATTCCTTGGCCACGAGCAGTTCCCCAAGGTTCAATGTTTATGGTAATGACTTTGGTTGGGGAAAACCTGTTGCAGTGAGAAGTGGCGGAGCAAATAAAAGAAACGGAAAGATTACTGTGTTTGCTGGGTCAGAAGAAGGAGGCATTGACATTGAAGTGTGCCTTCCTTATGAGATTTTGGAGGCCATGGGAAATGACCTTGAGTTCATGGATGCCATTTCCATATAA 1329 0.4605 MGAIRVISTTTIQAPSHNNGDSPQIINLTPCDLQFLPIETIQKGLLFHNPINAQDIQIQIQQLKHSFSSTLAFFPPLAGRLAIVEHHDNTSTSHIVCNNAGALFVHAVADNTSVSDILKPNYVPPVVHSFFPLNGVKNYEGTSQPLLAVQVTELVDGIFVGCTINHVVADGKSFWLFVNSWAEISRGYLKVSKLPALERWFLDGTDCPIRFPFTKQEEKQHLEFFNPQSPPERIFHFTKEKIAQLKAKANAEASTNKISSLQALLTHLWRSVIRCQRHDPQEEIHYFMAIGFRSRMVPPLPEDYFGNAATFGGVTMKVRDLLEGGLGKCSWEMNKMIASYTDEKVKSHYESWVKTPRLLWLGSVASSNSLATSSSPRFNVYGNDFGWGKPVAVRSGGANKRNGKITVFAGSEEGGIDIEVCLPYEILEAMGNDLEFMDAISI 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2393g00024 442 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 437 - -
Gabi2393g00024 442 Pfam Transferase family 5 437 - -
Gabi2393g00024 442 Gene3D - 225 432 IPR023213 -
Gabi2393g00024 442 Gene3D - 2 207 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2393g00024 Gabi-Chr2393 310962 312336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2393g00024 45 425 Monolignol Biosynthesis Gene Families AT5G48930 28.501 3.97e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2393g00024 - - gmx:100500257 606.29