Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2393g00023 ATGGGAGTCATCCGAGTCATCTCCACCAGTACAATTCAAGCACCGAGTCACAACAATGGTGACTCAACTCAGAAAATCAATTTAACCCCATGGGATATCCAGCTCCTCCCCGTTGACACCATCCAAAAAGGGCTTCTTTTTCACAATCCCAACAACACACCAGACACACAAATCCAAATCCAGAACCTCAAACACTCACTTTCCTCCACTCTTGCATTCTTTCCACCCCTCACAGGCCGTCTCATCATTACAGAACACAAATGTAACACTTGCTCCGCTTTCATCGCGTGCAACAACGTTGGTGCACTTTTTGTTCATGCTGTAGCAGAGAACACTAGTGTTGCTGACATCCAAAAACCAAACTACGTTCCTCCCATTGTCCACTCCTTCTTTCCACTCAACGGAATGAAAAACTATGAAGGAACATCACAGCCGTTGCTAGCAGTGCAAGTCACTGAGCTAGTTGACGGCATCTTCATTGGCTGCACAATCAACCACGTGGTTGCTGACGGCAAGTCGTTTTGGCTTTTCATAAATTCTTGGGCTGAAATCTCACGTGGTTACCAAAAAATATCAAAAGTCCCTGAACTTGAACGTTGGTTTCTTGATGGCATTGACTGCCCCATAAGATTTCATTTCACAAACAAGGAAGAGAAACAACACCCTGAAAACTTAAAACCACATTCACCACCTGAGAGGGTCTTCCATTTCACAAAGGAGAAAATTTCGCAACTCAAATCAAAAGCTAATGCAGAGGCCAACACAGATAGAATATCTTCTCTGCAAGCGCTTTTAACTCACCTTTGGCGCTCTGTGATCCGTTGCCAACGTCATGACCCACAAGAAGAGATCCATTATCTCATGATGATAGGGTTTAGACCCAGAACGGTTCCACCATTGCCAGAGGATTATTTTGGAAACGCTGCTATGTTTGGTGGTGTCACCATGAAAGCAGGGGAACTGCTTGAGGGTGGACTCGGCAAGTGTGCTTGGGAGATGAACAAGATGATAGCTACGTACACTGATGAGAAGGTGAAGAGCCACTATGAGTCTTGGGTTAGAACCCCATGGTTTCTTTCGCAGAGTAGCGTGGCCGGTCGTAATTCCTTGGCCACAAGCAGTTCCCCAAGGTTCAATGTTTATGGTAACGACTTTGGTTGGGGAAAACCTGTGGCAGTGAGAAGTGGCAGTGCAAATAAGAGAAACGGAAAGATTACTGTGTTTGCTGGGTCAGAAGAAGGTAGCATCGACATTGAAGTGTGCCTTCCTTATGAGATTTTGGAGGCCATGGGAAATGACCCTGACTTCATGGATGCCGTTTCCAGCTAA 1329 0.4567 MGVIRVISTSTIQAPSHNNGDSTQKINLTPWDIQLLPVDTIQKGLLFHNPNNTPDTQIQIQNLKHSLSSTLAFFPPLTGRLIITEHKCNTCSAFIACNNVGALFVHAVAENTSVADIQKPNYVPPIVHSFFPLNGMKNYEGTSQPLLAVQVTELVDGIFIGCTINHVVADGKSFWLFINSWAEISRGYQKISKVPELERWFLDGIDCPIRFHFTNKEEKQHPENLKPHSPPERVFHFTKEKISQLKSKANAEANTDRISSLQALLTHLWRSVIRCQRHDPQEEIHYLMMIGFRPRTVPPLPEDYFGNAAMFGGVTMKAGELLEGGLGKCAWEMNKMIATYTDEKVKSHYESWVRTPWFLSQSSVAGRNSLATSSSPRFNVYGNDFGWGKPVAVRSGSANKRNGKITVFAGSEEGSIDIEVCLPYEILEAMGNDPDFMDAVSS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2393g00023 442 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 437 - -
Gabi2393g00023 442 Gene3D - 3 203 IPR023213 -
Gabi2393g00023 442 Gene3D - 210 432 IPR023213 -
Gabi2393g00023 442 Pfam Transferase family 6 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2393g00023 Gabi-Chr2393 284987 286315 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2393g00023 61 425 Monolignol Biosynthesis Gene Families AT5G48930 27.649 2.98e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2393g00023 - - gmx:100797643 604.749