Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2393g00021 ATGTCAGCTGTCCGAGTCATCTCGACCAGTACGATCCAAGCTCCGAGTCAGGCTGACGTTGACTCAACTCAGTTTCAGAAAATCCATTTAACTCCATGGGATCTCGAATCCCTCAACCTTCGGATGAACCAAAAAGGGCTTCTTTTTCACAACCCCATCAACGCAGAAGACACACAAATCCAAATCCAAATCAAGAACCTCGAACGCTCACTTTCCTCCACTCTTGCATTCTTTCCACCCTTCGCAGGTTGTCTCATCATTACAGAACACAAAGACAACACTGCATCCGCTTTCATCGCGTGCAACAACGTCGGTGTACTGTTTGTCCATGCCGTAGCAGAGAACACTAGTGTTGCTGACATCCTTAAACCCAACTACGTTCCTCCAATTGTTCACTCCTTCTTTCCACTTAACGGAGTTAAAAACAAAGAAGGCACATCGCAGCCGTTGCTAGCAGTGCAAGTCACCAACCTAGTTGACGGCATCTTCATTGGCTGCACAATCAACCACGTGGCTGCTGACGGCAAGTCGTTTTGGCATTTCATCAATTCATGGGCTGAAATCTCACGTGGTTTCGATAAAATAACCAAACTCCCATTACTTGAACATTGGTTTCTCGATGGCATTAACCCTCCAATACGCTTTCCTTTCACAAAGAAAGAGACTCAACACTCCGAAAACCCCAACCCACATCCGAAACCACTACCTGTTCGGATCTTCCATTTCACGAAGGAAAAAATATCGCAACTCAAATCAAAAGCTAATGCAGAGGCCACCGCTCAAAAAATATCTTCTCTCCAAGCGCTTTTAACTCACCTTTGGTGCTGTGTGATTCCTTGCAAGCGAGTTGACCCACAAGAAGAGATTTGTTACTTGTTAGCAATAGATGTTCGGAGGAGATTGGTTCCACCGTTGCCAGAGAATTATTTTGGAAACGCATTGCAGGTTGGTGTTGTGACTATGAAAGCAGGGGAACTACTTGAAGGTGGGTTTTGCAAAGGTGCTTGGGAGATGAACAAGATGATAGCTTTGCAATCTGATGAGAAGGTGAAGAGTCACTATGAGTCTATGGCGAGAACCCCAATCCTGCTTCAACCGGATCGGTTGTCTAATAGATTCGCCTTGGCCACGGGAAGTTCCCCAAGGTTCGATGTTTATGGTAACGACTTTGGTTGGGGAAAACCTGTGGCAGTGAGAAGTGGCGGTTCAACTAATATTAATGGAATGGTTACCATGTTTGCTGGGGCAGAAGAAGGTAGCGTTGACCTTGAAGTGTGCCTTCCTTATGAGATTTTGGAGTCCATGGGAGATGACCCTGACTTCATCAACGGCATTTCCAACTAA 1344 0.4576 MSAVRVISTSTIQAPSQADVDSTQFQKIHLTPWDLESLNLRMNQKGLLFHNPINAEDTQIQIQIKNLERSLSSTLAFFPPFAGCLIITEHKDNTASAFIACNNVGVLFVHAVAENTSVADILKPNYVPPIVHSFFPLNGVKNKEGTSQPLLAVQVTNLVDGIFIGCTINHVAADGKSFWHFINSWAEISRGFDKITKLPLLEHWFLDGINPPIRFPFTKKETQHSENPNPHPKPLPVRIFHFTKEKISQLKSKANAEATAQKISSLQALLTHLWCCVIPCKRVDPQEEICYLLAIDVRRRLVPPLPENYFGNALQVGVVTMKAGELLEGGFCKGAWEMNKMIALQSDEKVKSHYESMARTPILLQPDRLSNRFALATGSSPRFDVYGNDFGWGKPVAVRSGGSTNINGMVTMFAGAEEGSVDLEVCLPYEILESMGDDPDFINGISN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2393g00021 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 442 - -
Gabi2393g00021 447 Gene3D - 216 436 IPR023213 -
Gabi2393g00021 447 Gene3D - 2 212 IPR023213 -
Gabi2393g00021 447 Pfam Transferase family 22 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2393g00021 Gabi-Chr2393 258426 259769 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2393g00021 41 433 Monolignol Biosynthesis Gene Families AT5G48930 28.261 1.90e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2393g00021 - - gmx:100797643 547.74