Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2392g00038 ATGGCTTCTGCAGATGTTGAGTACAGATGCTTTGTTGGTGGGCTCGCATGGGCCACCGACAACGATGCTCTCGAGAAAGCCTTCTCTCCCTATGGCGAGATCGTTGAATCGAAGATCATTAACGATCGCGAGACTGGAAGGTCAAGAGGTTTCGGATTCGTGACTTTCGCCTCTGAGCAGGCGATGAGGGATGCGATCGATGGGATGAACGGCCAGAACCTCGACGGCCGTAACATCACTGTGAACGAAGCTCAGTCCCGTGGCGGCGGCGGCGGCGGAGGTTTTGGAGGCGGAGGTGGTGGTGGATACAGCCGCGGAGGCGGTGGTGGTGGATATGGTGGAGGCGGTGGTCGTCGTGAGGGTGGCTACAACCGAAACGGCGGCAGCAGAGACCGTGGCTATGGTGATGGTGGATCCCGCTACTCTCGTGGCGGCGGCGGTGATGGTGGAAGCTGGAGGAGTTAG 465 0.5935 MASADVEYRCFVGGLAWATDNDALEKAFSPYGEIVESKIINDRETGRSRGFGFVTFASEQAMRDAIDGMNGQNLDGRNITVNEAQSRGGGGGGGFGGGGGGGYSRGGGGGGYGGGGGRREGGYNRNGGSRDRGYGDGGSRYSRGGGGDGGSWRS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2392g00038 154 Gene3D - 2 124 IPR012677 -
Gabi2392g00038 154 PANTHER GEO13361P1-RELATED 3 147 - -
Gabi2392g00038 154 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Gabi2392g00038 154 MobiDBLite consensus disorder prediction 67 154 - -
Gabi2392g00038 154 SMART rrm1_1 9 82 IPR000504 GO:0003723
Gabi2392g00038 154 FunFam Glycine-rich RNA-binding protein GRP1A 2 108 - -
Gabi2392g00038 154 SUPERFAMILY RNA-binding domain, RBD 8 116 IPR035979 GO:0003676
Gabi2392g00038 154 CDD RRM2_NsCP33_like 9 84 - -
Gabi2392g00038 154 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2392g00038 Gabi-Chr2392 292841 293879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2392g00038 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 32.911 3.83e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2392g00038 - K13195 ccaj:109800681 163.31