Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2392g00037 ATGGCTTCTGCAGATGTTGAGTACAGATGCTTTGTTGGTGGGCTCGCATGGGCCACCGACAACGATGCTCTCGAGAAAGCCTTCTCTCCCTATGGCGAGATCGTTGAATCGAAGATCATTAACGATCGCGAGACTGGAAGGTCAAGAGGTTTCGGATTCGTGACTTTCGCCTCTGAGCAGGCGATGAGGGATGCGATCGATGGGATGAACGGCCAGAACCTCGACGGCCGTAACATCACTGTGAACGAAGCTCAGTCCCGTGGCGGCGGCGGCGGCGGAGGTTTTGGAGGCGGAGGTGGTGGTGGATACAGCCGCGGAGGCGGTGGTGGTGGATATGGTGGAGGCGGTGGTCGTCGTGAGGGTGGCTACAACCGAAACGGCGGCAGTGGAGGCTACGGAAGTGGTGGCGGCGGCGGCGGTTATGGTGGAGGCAGAGACCGTGGCTATGGTGATGGTGGATCCCGCTACTCTCGTGGCGGCGGCGGTGATGGTGGAAGCTGGAGGAGTTAG 510 0.602 MASADVEYRCFVGGLAWATDNDALEKAFSPYGEIVESKIINDRETGRSRGFGFVTFASEQAMRDAIDGMNGQNLDGRNITVNEAQSRGGGGGGGFGGGGGGGYSRGGGGGGYGGGGGRREGGYNRNGGSGGYGSGGGGGGYGGGRDRGYGDGGSRYSRGGGGDGGSWRS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2392g00037 169 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Gabi2392g00037 169 FunFam Glycine-rich RNA-binding protein GRP1A 2 107 - -
Gabi2392g00037 169 SUPERFAMILY RNA-binding domain, RBD 8 116 IPR035979 GO:0003676
Gabi2392g00037 169 MobiDBLite consensus disorder prediction 69 169 - -
Gabi2392g00037 169 Gene3D - 2 117 IPR012677 -
Gabi2392g00037 169 PANTHER GEO13361P1-RELATED 3 162 - -
Gabi2392g00037 169 SMART rrm1_1 9 82 IPR000504 GO:0003723
Gabi2392g00037 169 CDD RRM2_NsCP33_like 9 84 - -
Gabi2392g00037 169 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2392g00037 Gabi-Chr2392 292841 293879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2392g00037 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 32.911 1.26e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2392g00037 - K13195 ccaj:109800681 163.31