Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2392g00001 ATGCAACAACCTCACCATTACTTCTCCGCTGCCAAACCATCTTTTCCCTTACCCGTCGACGCCGATCAAAAAGCCACCAAGTTCCAACCATTCTCGGCGGCGCCACCGCACATGCGCACCTTCCATCTAGCATGGTTCAACCTCTTCTCATGTTTCTTCTCAACCTTCTCCATCCCCCCACTCCTCCCCATAATCCGCGACGACCTCAACCTAACCCCCGCCGAAATAGGCGCCGCAGGCTCCGCCGCCTTCGCCGGCTCAATCGTCTCCCGCCTCCTAATGGGTCCCACATGCGACCTCTTGGGCCCACGCATAGCCTCGGGAACACTCTCTCTCCTAACCGCACCCATAATCCTCGCAATCTCACTAGTTTCAACGCCACAAGCCTTCATCACAATCCGTTTTTTAGTGGGGTTCTCACTCGCAAACTTCGTTTCAAACCAGTTCTGGATGAGCTCAATGTTCTCCTCCACCGTGGTCGGCATGGCCAACGGCGTCGCCGCCGGATGGGCAAACATGGGTGCCGGCATGACTCAACTAGTCATGCCACTTGTCTACTCCCTAATAATGTACCTCTTCAATGTCCCATCTTCCACTGCTTGGAGATTAGCGTTCATAGTTCCCGCAATTTTTCAAGCAATAACGGGTATCTTAGTGTTAGCATTTGGACAGGACCTACCCTCAGGGAACTATAACAACGTGGAGAAAGAGAAGGGTAAAAAAGAGAATGTGTTGAAGGTAGTGTTAGGTGGTTTGGAGAATTACAGAGCGTGGATAATGAGTTTGCTTTATGGGTTTTCGTTTGGGGTGGAGTTAACAACGGATAATATAATAGCGCAGTATTATTATGACAGGTTCGGGGTGAATGTGCAAACGGCTGGGATAATTGCGGCGTGTTTTGGGATGGGGAATTTGGTTTCGAGGCCAATGGGTGGTGTTGTTTCGGACATGATGGGGAAGAGGTTTGGGATGAGGGGAAGGTTGTGGGGATTGTGGGTGGTTCAAACGGTGGCCGGTATGCTATGCGTGTTGCTTGGTAGAGTTGACACGTTGTGGGGTTCTATCCTTGTCATGTGCTGCTTTTCTCTCTTTGTTGAAGCTGCTTCTGGCCTCATCTTTGGTGTCGTTCCTTTCGTTTCCAAAAGATCGCTAGGAGTAATATCAGGAATGACAGGAAGCGGTGGAACGTTAGGGGCTGTTGTGACTCAATTATTGTTGTTCTCAGGCTCCAACGTGTCGAAGGAAACAGGCATATCCCTAATGGGCCTAATGATGATATTTTGTACTCTTCCTGTAACCTTGATCTACTTCCCTCAATGGGGTGGCATGTTTTGTGGCCCTTCCTCCAATCATGGTTCCCTCCAAGAACATTATAGGTTGCTAGAATAG 1389 0.4975 MQQPHHYFSAAKPSFPLPVDADQKATKFQPFSAAPPHMRTFHLAWFNLFSCFFSTFSIPPLLPIIRDDLNLTPAEIGAAGSAAFAGSIVSRLLMGPTCDLLGPRIASGTLSLLTAPIILAISLVSTPQAFITIRFLVGFSLANFVSNQFWMSSMFSSTVVGMANGVAAGWANMGAGMTQLVMPLVYSLIMYLFNVPSSTAWRLAFIVPAIFQAITGILVLAFGQDLPSGNYNNVEKEKGKKENVLKVVLGGLENYRAWIMSLLYGFSFGVELTTDNIIAQYYYDRFGVNVQTAGIIAACFGMGNLVSRPMGGVVSDMMGKRFGMRGRLWGLWVVQTVAGMLCVLLGRVDTLWGSILVMCCFSLFVEAASGLIFGVVPFVSKRSLGVISGMTGSGGTLGAVVTQLLLFSGSNVSKETGISLMGLMMIFCTLPVTLIYFPQWGGMFCGPSSNHGSLQEHYRLLE 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2392g00001 462 Pfam Major Facilitator Superfamily 45 401 IPR011701 GO:0022857|GO:0055085
Gabi2392g00001 462 Gene3D MFS general substrate transporter like domains 36 232 IPR036259 -
Gabi2392g00001 462 Gene3D MFS general substrate transporter like domains 242 441 IPR036259 -
Gabi2392g00001 462 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 434 IPR020846 GO:0022857
Gabi2392g00001 462 CDD MFS_NRT2_like 41 434 IPR044772 GO:0015112
Gabi2392g00001 462 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 5 457 IPR044772 GO:0015112
Gabi2392g00001 462 SUPERFAMILY MFS general substrate transporter 33 437 IPR036259 -
Gabi2392g00001 462 FunFam Probable high-affinity nitrate transporter 2.4 33 229 - -
Gabi2392g00001 462 FunFam Nitrate transporter 2.1 241 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2392g00001 Gabi-Chr2392 21017 26450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2392g00001 13 447 Inorganic Solute Cotransporters AT5G14570 63.496 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2392g00001 K02575 - qsa:O6P43_008930 696.812