Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2391g00032 ATGGTTATGGATGATGATGAGAGGGATGTTGAGAGAGAGGGGATGATGATGATGATTGGGAACGATGGCAAAGAAAAGAGTATAGAGAGAGGCAAATCAGGATTAGGATTAAGATTAGAATCAGGATCAGGTTCAGGTTCATGTTCAGGTTCAGGTTCAGGTTCAGGATCAGGATCAGAGAGGCTGAGAGAGCCTCTGCTTGGCACCAATAACAGGATCAACAACACTTCCCAGCTTGCCATTGTCGGAGCCAATGTTTGTTTTATTGAAAGTCTCGATTACGAGATCATTGAGAATGATCTTTTCAAACAAGACTGGAGGTCTAGATCAAAGGCTGAGATAGGCCAGTATGTTGTCCTAAAATGGACCCTTGCACTTTTCATTGGGTTAGGCACAGGTCTTGTTGCCTTCTTCAATAACATTGGAGTTGAGAATATTGCTGGTTTCAAGCTTCTACTCACCAACAATCTCATGCTCACGCGAAAGTATCATCAGGCCTTTGTAGTATATGTTGGATGTAACATGATTTTAGCCGTTGCTGCTGCAGCCCTCTGTGCCTACATTGCCCCTGCAGCAGCAGGGTCCGGCATACCTGAGGTGAAGGCATACCTCAATGGTGTAGACGCTCCTTCTATATTAGCTCCAACTACCCTCTTTGTAAAGATTTTTGGTTCAATATTTGGGGTTGCGGCTGGTTTTGTTGTGGGTAAGGAAGGACCTATGGTACACACTGGTTCTTGCATAGCTAATTTACTTGGACAAGGTGGTTCTAGAAAATATCGGTTGACATGGAGATGGCTCAGACATTTTAAAAATGACCGAGACCGAAGGGATTTGATCACGTGTGGTGCAGCTGCTGGTGTTGCTGGTGCTTTCCGTGCCCCAGTTGGTGGTGTCCTTTTTGCACTTGAAGAAGCAGCTTCCTGGTGGAGGAGTGCTCTTCTGTGGCGAACATTTTTTACGACAGCTGTGGTAGCTGTAGTGCTGAGAGGTTTCGTAGAATTATGCCGGGGTGGAAAATGTGGTCTTTTTGGGGAAGGAGGTTTGATAATGTTTGAGGTTAATTCAGCAAAGCCTGCTTACACCACACCTGACCTCCTCGCAGTTATATTTCTTGGAGTTATTGGAGGTCTTTTAGGAAGCCTTTACAATTATCTTGTGGACAAGGTCCTTCGCACTTACGCCATCATAAATGAGAAAGGCCCTATATTCAAAGTTCTACTTGTCATGATTATCTCCTTTTTGACCTCTTGCTGTTCATTTGGCCTTCCATGGCTATCAAAGTGCATCCCTTGTCCTCCTCATTTGAGGGATCAGTGCCCAACCGTAGGGCGCTCCGGACACTACAAGAATTTTCAGTGCCCACCTAACCACTACAACGACCTTGCCTCTCTCTTTTTTACTACTAATGATGATGCTATTCGTAACTTATTTATTGCTGGCTCTGACAAAAGATTTCTGCTCTCTAGTCTTCTGATTTTCTTTGTGGCCATATACTTTCTTGGAATCATCACTTATGGCATTGCCATTCCCTCTGGGCTCTTTATTCCTGTTATACTTGCTGGAGCTTCGTATGGGCGTCTTGTAGGAAGTCTCTTGAGTCCATTCACTGTTCTTGATGTGGGTTTGTTTGCCCTCCTTGGGGCTGCATCCTTCCTTGGAGGCACCATGAGAATGACCGTTTCTCTTTGTGTCATACTTCTTGAACTCACAAATAACCTGCTGATGCTTCCATTGGTGATGTTGGTTCTCCTTATTTCCAAGTCTGTGGCTGATTGTTTTAACAAAGGAGTTTATGATCAGATTGTGCAAATGAAGGGGCTACCTTATATGGAAGCACATGCAGAACCATACATGAGGCAATTAATTGCAAGTGATGTTGTTTCTGGTCCATTGGTTACATTTGCTGGGGTTGAAAAAGTGGGGAACATTGTGCATGCTTTAAAGGTCACTGGACATAATGGGTTTCCTGTAATTGATGAGCCTCCTTTCTCAGATGCTCCTGAATTGTGTGGGTTGGTTTTGAGGTCTCATCTGCTTGTACTCCTTAAACACAGGACATTTACAAAGGAGAGAGGGATGACTGGATCCTCCATTATGAGAAACTTCAAGGCACATGATTTTGCAAAGCCAGGTTCAGGCAAGGGGATCAAGCTGGAGGATATAGACATTTCTGAGAACGAGATGGAAATGTATGTTGATCTCCATCCGATTACTAATACGTCACCATATACAGTTGTGGAAACAATGTCTCTAGCTAAAGCTGCTCTTCTTTTCCGGGAGCTTGGCCTCAGGCACTTGTTGGTGGTGCCAAAGACACCGGGAAGACCTCCAATTGTCGGGCTCCTGACAAGACATGATTTCATGCCTGAGCATGTCTTGGGACTTTACCCTCACTTCCACTCCCATAAGTAG 2415 0.4455 MVMDDDERDVEREGMMMMIGNDGKEKSIERGKSGLGLRLESGSGSGSCSGSGSGSGSGSERLREPLLGTNNRINNTSQLAIVGANVCFIESLDYEIIENDLFKQDWRSRSKAEIGQYVVLKWTLALFIGLGTGLVAFFNNIGVENIAGFKLLLTNNLMLTRKYHQAFVVYVGCNMILAVAAAALCAYIAPAAAGSGIPEVKAYLNGVDAPSILAPTTLFVKIFGSIFGVAAGFVVGKEGPMVHTGSCIANLLGQGGSRKYRLTWRWLRHFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFVELCRGGKCGLFGEGGLIMFEVNSAKPAYTTPDLLAVIFLGVIGGLLGSLYNYLVDKVLRTYAIINEKGPIFKVLLVMIISFLTSCCSFGLPWLSKCIPCPPHLRDQCPTVGRSGHYKNFQCPPNHYNDLASLFFTTNDDAIRNLFIAGSDKRFLLSSLLIFFVAIYFLGIITYGIAIPSGLFIPVILAGASYGRLVGSLLSPFTVLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKSVADCFNKGVYDQIVQMKGLPYMEAHAEPYMRQLIASDVVSGPLVTFAGVEKVGNIVHALKVTGHNGFPVIDEPPFSDAPELCGLVLRSHLLVLLKHRTFTKERGMTGSSIMRNFKAHDFAKPGSGKGIKLEDIDISENEMEMYVDLHPITNTSPYTVVETMSLAKAALLFRELGLRHLLVVPKTPGRPPIVGLLTRHDFMPEHVLGLYPHFHSHK 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2391g00032 804 CDD CBS_pair_voltage-gated_CLC_euk_bac 623 791 - -
Gabi2391g00032 804 SMART cbs_1 631 684 IPR000644 -
Gabi2391g00032 804 SMART cbs_1 742 793 IPR000644 -
Gabi2391g00032 804 MobiDBLite consensus disorder prediction 40 58 - -
Gabi2391g00032 804 ProSiteProfiles CBS domain profile. 738 802 IPR000644 -
Gabi2391g00032 804 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 69 794 - -
Gabi2391g00032 804 PRINTS Chloride channel signature 542 558 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gabi2391g00032 804 PRINTS Chloride channel signature 510 530 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gabi2391g00032 804 PRINTS Chloride channel signature 560 579 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gabi2391g00032 804 PRINTS Chloride channel signature 285 304 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gabi2391g00032 804 PRINTS Chloride channel signature 598 612 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gabi2391g00032 804 PRINTS Chloride channel signature 190 207 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gabi2391g00032 804 PRINTS Chloride channel signature 221 240 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gabi2391g00032 804 MobiDBLite consensus disorder prediction 1 64 - -
Gabi2391g00032 804 Pfam CBS domain 740 788 IPR000644 -
Gabi2391g00032 804 CDD ClC_6_like 90 611 - -
Gabi2391g00032 804 SUPERFAMILY CBS-domain pair 615 789 IPR046342 -
Gabi2391g00032 804 Gene3D Clc chloride channel 113 611 - -
Gabi2391g00032 804 MobiDBLite consensus disorder prediction 1 33 - -
Gabi2391g00032 804 Gene3D - 612 790 IPR046342 -
Gabi2391g00032 804 PRINTS Plant CLC chloride channel signature 320 330 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gabi2391g00032 804 PRINTS Plant CLC chloride channel signature 338 345 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gabi2391g00032 804 PRINTS Plant CLC chloride channel signature 462 478 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gabi2391g00032 804 PRINTS Plant CLC chloride channel signature 95 103 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gabi2391g00032 804 PRINTS Plant CLC chloride channel signature 306 314 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gabi2391g00032 804 Pfam Voltage gated chloride channel 178 592 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gabi2391g00032 804 FunFam Chloride channel ClC3 113 427 - -
Gabi2391g00032 804 SUPERFAMILY Clc chloride channel 99 613 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2391g00032 Gabi-Chr2391 246148 254561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2391g00032 3 804 Ion Channels AT5G49890 74.226 0.0 1163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2391g00032 K05016 - jre:108988922 1188.33