Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2391g00021 ATGAGCAGGTTCTGTTCAGATCTTAAACATCAGCTCCCACCTTTGTTTTCTCTTTCAAGCCATGGCGCTGGGAAATCAAACAAAAATGCTTACAAGACACTCATTGCAGCGGAGTATGCTGGTGTGCTTGTTGAATTTGCCCCAAATTTTGAGATGGGTGTCTCTAATAAAACCCCTGAATTTCTCAAGATGAATCCTATTGGCAAGATTCCTGTCTTGGAAACACCAGATGGTCCAATATTCGAGAGCAATGCCATTGCTCGATATGTTACTCGATTGAAGGGTGACAACACTCTGTATGGATCTTCTTTGATTGATTATGCCCACATTGAACAATGGATTGATTTTTCATCATTGGAGATTGATGCTAATCTTATTAAGTGGTACAGCCCAAGAATGGGACGAGCACCATACCTTCCTCCAGCCGAGGAGACCGCAATTGCTGCACTGAAGAGAGCTTTGGGTGCTTTGAACACTTATCTTGCCTCCAATACTTACTTGGTTGGGCATTCCGTGACCCTGGCTGACATCATAATGACATGCAATTTGTATTTTGGTTTCACTAATCTCTTAGTCAAGAGCTTCACATCAGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAATCAGCCAAACTTCCGAAAGATATTAGGTCAGGTCAAGCAGACTGAAGCTATTCCACCTGTTCAATCTGCAAAGAAGCCTTCCCAGCCAAAAGAATCTAAACCCAAGGTAAAGGATGAACCAAAGAAAGAGGCCAACCAAGAGCCAGAAAAGCCCAAAGAAGAAGCAGAAGAAGAGGAAGCACCCAAGCCCAAACCAAAGAATCCTCTTGATCTTCTTCCTCCAAGTAAGATGATACTGGATGAGTGGAAAAGACTCTACTCAAACACTAAAACCAACTTCCGGGAGGTTGCAATCAAAGGATTCTGGGACATGTATGATCCTGAAGGATACTCTCTCTGGTTCTGTGATTACAAATACAATGATGAGAACACTGTATCCTTTGTTACATTGAACAAGGTTGGTGGATTTCTTCAGCGGATGGATTTGGCCCGCAAGTATGCATTTGGAAAGATGCTTGTGATTGGATCAGAGCCACCATTTAAGGTGAAGGGGTTGTGGCTTTTCCGCGGGCAAGAAGTCCCACAATTCGTGATTGATGAATGCTATGACATGGAGCTCTACGAGTGGACTAAGGTTGACATCTCTGATGAAGCTCAGAAGGAGCGTGTCAATCAGATGATTGAAGATTTTGAGCCTTTTGAGGGAGAGCCTCTTTTGGATGCTAAGTGCTTTAAGTGA 1311 0.4325 MSRFCSDLKHQLPPLFSLSSHGAGKSNKNAYKTLIAAEYAGVLVEFAPNFEMGVSNKTPEFLKMNPIGKIPVLETPDGPIFESNAIARYVTRLKGDNTLYGSSLIDYAHIEQWIDFSSLEIDANLIKWYSPRMGRAPYLPPAEETAIAALKRALGALNTYLASNTYLVGHSVTLADIIMTCNLYFGFTNLLVKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQTEAIPPVQSAKKPSQPKESKPKVKDEPKKEANQEPEKPKEEAEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEVPQFVIDECYDMELYEWTKVDISDEAQKERVNQMIEDFEPFEGEPLLDAKCFK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2391g00021 436 MobiDBLite consensus disorder prediction 226 284 - -
Gabi2391g00021 436 SUPERFAMILY Thioredoxin-like 28 101 IPR036249 -
Gabi2391g00021 436 CDD GST_C_EF1Bgamma_like 106 226 - -
Gabi2391g00021 436 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 103 231 IPR010987 -
Gabi2391g00021 436 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 17 98 IPR004045 -
Gabi2391g00021 436 Gene3D Glutaredoxin 23 90 - -
Gabi2391g00021 436 MobiDBLite consensus disorder prediction 239 276 - -
Gabi2391g00021 436 FunFam Elongation factor 1-gamma 1 276 436 - -
Gabi2391g00021 436 Pfam Elongation factor 1 gamma, conserved domain 275 383 IPR001662 GO:0003746|GO:0006414
Gabi2391g00021 436 FunFam Elongation factor 1 gamma 96 232 - -
Gabi2391g00021 436 SUPERFAMILY GST C-terminal domain-like 89 230 IPR036282 -
Gabi2391g00021 436 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 276 436 IPR001662 GO:0003746|GO:0006414
Gabi2391g00021 436 Pfam Glutathione S-transferase, C-terminal domain 146 213 IPR004046 -
Gabi2391g00021 436 CDD GST_N_EF1Bgamma 25 93 - -
Gabi2391g00021 436 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 276 436 IPR036433 GO:0003746|GO:0006414
Gabi2391g00021 436 Pfam Glutathione S-transferase, N-terminal domain 27 91 IPR004045 -
Gabi2391g00021 436 SFLD Glutathione Transferase (cytosolic) 34 206 IPR040079 -
Gabi2391g00021 436 SFLD Main (cytGST) 34 206 - -
Gabi2391g00021 436 Gene3D - 96 231 - -
Gabi2391g00021 436 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 23 436 IPR044628 GO:0004364
Gabi2391g00021 436 FunFam Elongation factor 1B gamma 17 90 - -
Gabi2391g00021 436 SMART EF1G_2 275 383 IPR001662 GO:0003746|GO:0006414
Gabi2391g00021 436 SUPERFAMILY eEF1-gamma domain 276 436 IPR036433 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2391g00021 Gabi-Chr2391 206324 209020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2391g00021 25 436 Eukaryotic Initiation Factors Gene Family AT1G57720 76.942 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2391g00021 K03233 - gmx:547637 737.258