Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi2391g00019 | ATGGCGCTGATCCTTCATGCAGGGAAATCAAACAAAAATGCTTACAAGACACTCATTGCAGCGGAGTATGCTGGTGTGCTTGTTGAATTTGCCCCAAATTTTGAGATGGGTGTCTCTAATAAAACCCCTGAATTTCTCAAGATGAATCCTATTGGCAAGATTCCTGTCTTGGAAACACCAGATGGTCCAATATTCGAGAGCAATGCCATTGCTCGATATGTTACTCGATTGAAGGGTGACAACACTCTGTATGGATCTTCTTTGATTGATTATGCCCACATTGAACAATGGATTGATTTTTCATCATTGGAGATTGATGCTAATCTTATTAAGTGGTACAGCCCAAGAATGGGACGAGCACCATACCTTCCTCCAGCCGAGGAGACCGCAATTGCTGCACTGAAGAGAGCTTTGGGTGCTTTGAACACTTATCTTGCCTCCAATACTTACTTGGTTGGGCATTCCGTGACCCTGGCTGACATCATAATGACATGCAATTTGTATTTTGGTTTCACTAATCTCTTAGTCAAGAGCTTCACATCAGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAATCAGCCAAACTTCCGAAAGATATTAGGTCAGGTGAAGGGGTTGTGGCTTTTCCGCGGGCAAGAAGTCCCACAATTCGTGATTGATGAATGCTATGACATGGAGCTCTACGAGTGGACTAAGGTTGACATCTCTGATGAAGCTCAGAAGGAGCGTGTCAATCAGATGATTGAAGATTTTGAGCCTTTTGAGGGAGAGCCTCTTTTGGATGCTAAGTGCTTTAAGTGA | 810 | 0.4333 | MALILHAGKSNKNAYKTLIAAEYAGVLVEFAPNFEMGVSNKTPEFLKMNPIGKIPVLETPDGPIFESNAIARYVTRLKGDNTLYGSSLIDYAHIEQWIDFSSLEIDANLIKWYSPRMGRAPYLPPAEETAIAALKRALGALNTYLASNTYLVGHSVTLADIIMTCNLYFGFTNLLVKSFTSEFPHVERYFWTLVNQPNFRKILGQVKGLWLFRGQEVPQFVIDECYDMELYEWTKVDISDEAQKERVNQMIEDFEPFEGEPLLDAKCFK | 269 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi2391g00019 | 269 | Pfam | Glutathione S-transferase, N-terminal domain | 2 | 75 | IPR004045 | - | |
| Gabi2391g00019 | 269 | SUPERFAMILY | eEF1-gamma domain | 205 | 269 | IPR036433 | GO:0003746|GO:0006414 | |
| Gabi2391g00019 | 269 | CDD | GST_N_EF1Bgamma | 5 | 77 | - | - | |
| Gabi2391g00019 | 269 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 87 | 220 | IPR010987 | - | |
| Gabi2391g00019 | 269 | Gene3D | - | 80 | 209 | - | - | |
| Gabi2391g00019 | 269 | FunFam | Elongation factor 1 gamma | 80 | 210 | - | - | |
| Gabi2391g00019 | 269 | Gene3D | Glutaredoxin | 1 | 74 | - | - | |
| Gabi2391g00019 | 269 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 1 | 207 | IPR044628 | GO:0004364 | |
| Gabi2391g00019 | 269 | FunFam | Elongation factor 1B gamma | 1 | 74 | - | - | |
| Gabi2391g00019 | 269 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
| Gabi2391g00019 | 269 | SFLD | Glutathione Transferase (cytosolic) | 5 | 190 | IPR040079 | - | |
| Gabi2391g00019 | 269 | SUPERFAMILY | Thioredoxin-like | 2 | 85 | IPR036249 | - | |
| Gabi2391g00019 | 269 | CDD | GST_C_EF1Bgamma_like | 90 | 207 | - | - | |
| Gabi2391g00019 | 269 | SFLD | Main (cytGST) | 5 | 190 | - | - | |
| Gabi2391g00019 | 269 | SUPERFAMILY | GST C-terminal domain-like | 73 | 206 | IPR036282 | - | |
| Gabi2391g00019 | 269 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 206 | 269 | IPR001662 | GO:0003746|GO:0006414 | |
| Gabi2391g00019 | 269 | Pfam | Glutathione S-transferase, C-terminal domain | 129 | 197 | IPR004046 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gabi2391g00019 | Gabi-Chr2391 | 206324 | 209022 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gabi2391g00019 | 1 | 269 | Eukaryotic Initiation Factors Gene Family | AT1G09640 | 73.606 | 6.51e-151 | 420 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gabi2391g00019 | K03233 | - | gmx:547637 | 390.963 |