Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2391g00015 ATGTCAAGCGTCGTCTCAGCTTTGGTAAACAAGTTGATGAATGAGGAAGACTCTAACCCAAATGGTGAATTTAGTGATGGTGAGAAAGGAACCTTGAATTCGAAAAAGAGATCCATAAATGACATGTCTCAATCTATTTGCCTTTTCAAGAAATACCTGCTCACTAGGGGTCGAAGTAACATCAGAAGAGCAGACAGACAAGAATGTGAACCCTCGTTTCAAAGAGAAGCTTCTTCCTTAGAGCAAAAGCTCCTTCCACAAATGAGCTCAAGGTGTGATGGAGTGCCTTCACCTCTGTCAGAAGATAGGTTTTCAACAGCACAGCTTACGATATTTTATGGAGGTGATATAAATGTTTACGATAACATTCCTGTTGACAAGGCTCAAGCTATCATGCTACTAGCTAGCGAGAGCTCATTATCAAATATCGCGGCAACAGAAATTCCAAAAAAGCATATGGAAGCACCATCTTATCGATCTAATGTGACACCGATAAACAAACCCAAAATAGGGATTCCGATGGCAAGAAGGTATTCTCTCCAATGTTTCCTCAAAAAACGTCGAAACCGGATACTTGAAAAATCACCTTATGCGTCTCCTAGCAATAGCTCAAGTTTAAGGAAAATGGCTGACGTGGCATTAAATGAAGCCCCGTATCCTAGTCATTCAGTTTCTCTTTCGCCTTTTCCTTCACGTTTAGGTTTCTGTTCGTCTCTCAGTTGA 723 0.4094 MSSVVSALVNKLMNEEDSNPNGEFSDGEKGTLNSKKRSINDMSQSICLFKKYLLTRGRSNIRRADRQECEPSFQREASSLEQKLLPQMSSRCDGVPSPLSEDRFSTAQLTIFYGGDINVYDNIPVDKAQAIMLLASESSLSNIAATEIPKKHMEAPSYRSNVTPINKPKIGIPMARRYSLQCFLKKRRNRILEKSPYASPSNSSSLRKMADVALNEAPYPSHSVSLSPFPSRLGFCSSLS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2391g00015 240 MobiDBLite consensus disorder prediction 9 28 - -
Gabi2391g00015 240 ProSiteProfiles Tify domain profile. 102 137 IPR010399 -
Gabi2391g00015 240 Pfam Jas motif 173 197 IPR018467 -
Gabi2391g00015 240 Pfam tify domain 106 136 IPR010399 -
Gabi2391g00015 240 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 35 204 IPR040390 -
Gabi2391g00015 240 SMART tify_2 102 137 IPR010399 -
Gabi2391g00015 240 MobiDBLite consensus disorder prediction 9 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2391g00015 Gabi-Chr2391 196519 198950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2391g00015 108 197 Tify Gene Family AT5G20900 34.234 1.10e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi2391g00015 tify 4.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2391g00015 K13464 - qsu:112020895 153.295