Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2382g00002 ATGGGTTTTCGTTTACCAGGTATCAAAAGAGCATCATTTGTTGCAAACAAAGCAACTTCGAAAGTAGTGGACGTGCCAAAGGGCTATCTTGCAGTGTATGTTGGAGAGAAAATGAAGCGGTTTGTGATTCCCATATCATATTTGAACCAACCTTCATTTCAATACTTGCTGAGCCAAGCTGAGGAAGAATTCGGGTATGATCATCCACTCGGTGGTCTCACAATTCCTTGCAGAGAAGATGTGTTCTTCGATATCACTTCTCGCTTGGATAGGTGCTAA 279 0.4229 MGFRLPGIKRASFVANKATSKVVDVPKGYLAVYVGEKMKRFVIPISYLNQPSFQYLLSQAEEEFGYDHPLGGLTIPCREDVFFDITSRLDRC 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2382g00002 92 Pfam Auxin responsive protein 15 88 IPR003676 GO:0009733
Gabi2382g00002 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2382g00002 Gabi-Chr2382 26028 26755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2382g00002 24 82 Calmodulin-binding Proteins AT3G43120 57.627 8.09e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2382g00002 K14488 - gmx:100806671 157.147