Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2380g00007 ATGGGTAATTGCTGGTATAAATGGGAATCATCAGATTATAGAATATCATCCAATGCAAAGACTGATTCACCAAAAGAACAAAACCAGGAAATGAGACAAAGAAATGATGATAGAAACTTACCACGGAATCCTGAAGAAGTAGAAGACCTACGCCGTGATTCAGCTGCAAATCCATTGATTGCATTCACTTATGATGAGTTAAAGATAATCACTGGAAATTTTAGGCCAGATCGTGTCTTGGGGGGAGGAGGATTTGGAAGTGTTTATAAAGGGTTTATTTCTGAGGAGTTAAGGAAGGGGCTTCCTTCTCTTCCTGTAGCTGTTAAGGTTCATGATGGTGACAACAGTCATCAAGGGCACAGAGAATGGCTGGCAGAAGTCATATTTTTGGGGCAGCTTTCACATCCAAATCTAGTGAAATTAATTGGATACTGCTGCGAAGATGAACATAGGGTGCTAATATATGAGTATATGGCCCGTGGAAGTGTGGAAAACAATCTGTTCTCCAAAATTTTGCTTCCCATGCCATGGTCCATAAGAATGAAGATTGCACTTGGTGCTGCAAAGGGACTTGCATTTCTTCATGAAGCAGATAAACCTGTCATCTATCGTGATTTTAAGACATCAAATATTTTATTGGATCTGGACTATAATGCAAAACTTTCTGACTTTGGCCTCGCTAAAGATGGACCGGTTGGAGATAAATCTCATGTTTCTACTCGAATAATGGGAACATATGGGTATGCTGCACCTGAATACATAATGACTGGTCATCTTACCCCTAGAAGTGATGTTTACAGTTTTGGTGTTGTACTTCTTGAACTTATCACTGGAAGAAAATCTTTAGACAAGTTAAAACCTGCTAGAGAGCAGAACCTTACAGAATGGGCTCTTCCTTTGCTGAAGGAAAAGAAAAAAGTTCTAAATATTATAGATCCAAGGCTTGAAGGTGATTATCCAGTGAAAGGAGTTCACAAGGCTGCAATGCTTGCATATCATTGCTTGAACCGCAATCCAAAAGCAAGGCCTCTAATGCGAGATGTTGTTGATTCATTGGAGCCTTTGCAGGCACACAATGAGGTCTCTATTGAAAAAACATTGACCATAATCAGTGAGGTTCCCCAAGATGATTTGAAAAGGAAAGATGCTGAATGA 1155 0.3965 MGNCWYKWESSDYRISSNAKTDSPKEQNQEMRQRNDDRNLPRNPEEVEDLRRDSAANPLIAFTYDELKIITGNFRPDRVLGGGGFGSVYKGFISEELRKGLPSLPVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEYMARGSVENNLFSKILLPMPWSIRMKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELITGRKSLDKLKPAREQNLTEWALPLLKEKKKVLNIIDPRLEGDYPVKGVHKAAMLAYHCLNRNPKARPLMRDVVDSLEPLQAHNEVSIEKTLTIISEVPQDDLKRKDAE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2380g00007 384 ProSiteProfiles Protein kinase domain profile. 74 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2380g00007 384 Gene3D Phosphorylase Kinase; domain 1 38 157 - -
Gabi2380g00007 384 FunFam Serine/threonine-protein kinase BIK1 41 157 - -
Gabi2380g00007 384 SUPERFAMILY Protein kinase-like (PK-like) 51 352 IPR011009 -
Gabi2380g00007 384 Gene3D Transferase(Phosphotransferase) domain 1 158 375 - -
Gabi2380g00007 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gabi2380g00007 384 ProSitePatterns Protein kinases ATP-binding region signature. 80 109 IPR017441 GO:0005524
Gabi2380g00007 384 PANTHER OS01G0588500 PROTEIN-RELATED 31 356 - -
Gabi2380g00007 384 FunFam Probable serine/threonine-protein kinase PBL8 158 371 - -
Gabi2380g00007 384 MobiDBLite consensus disorder prediction 14 50 - -
Gabi2380g00007 384 MobiDBLite consensus disorder prediction 25 50 - -
Gabi2380g00007 384 Pfam Protein tyrosine and serine/threonine kinase 77 352 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2380g00007 Gabi-Chr2380 53709 60433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2380g00007 21 368 Glycoside Hydrolase AT3G07070 45.600 3.07e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi2380g00007 PK_Tyr_Ser-Thr 5.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2380g00007 - - gmx:100808795 684.1