Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2380g00004 ATGGAGGTGGCCAAGCTTGTAGTTTTGCCAGCAGTTTTGGCACTCTTTGTCCTTTGTCTGCATTTCATAGCTAAAACTGTCAAACTTAGAAAACATCAAGTCTTGCATCTTCCTCTGGGAAGTTTCGGATGGCCTATTGTTGGAGAAACCTTTGAGTTTTTGAGATCAGGTCGTGAGGGAAACATATTTAGGTTCATACAAGAGAGAATGAACAAATATGACTCCAGGGTGTTCAAGACTTCAATGCTTGGAGACCCTATGGCTGTGTTTTGTGGGCCAGCTGGGAACAAGTTCTTGTTTAGCAATGAGAACAAGAATGTCCAAGTATGGTGGCCAAGCTCAATAAGGAAGCTGTTAAGGTTGTCTCTTGTTATGAAGGTTGGTGATGAAGCAAAGATGACAAAAAAGTTACTCATGGGGTTTCTTAATCCTGAAGCACTCAGAAATTGGCTGCCAAAAATGGATAGCATTGCTCAGCGCCATATAAGCACACATTGGGAAGGAAAGGAGCAGGTGCATGTCTATCCCATAGTACAGCTATACACGTTTAAATTGGCTTGTTGCTTATTTTTAAGCATTGAAGACTCTATCCTTGTGTCAAAGCTTTCCTCAAAATTTGATGAATTTCTGAAAGGGATAATTGGATTCCCCATCAACTTGCCTGGAACAAGGTTTTATAGGGCAATGAAAGCTGCAAATGAAATAAGGAAAGAAATTAAAATGATTCTGAAGAAAAGGAAAGTGGATTTGGAAGAGAAGAGGGTGTTACCTACCCAAGACCTTGTATCACATTTGCTTGTTACACCTGACCCTAGTGGAAGGTTTCTGACCGAAACGGAGATTATTGATAACATACTATTACTGCTTTTTGCTGGCAATGATACTTCTAGATCAGCGTTATCATCCATCATGAAGTATCTTGGGCAGTTGCCAGAAGTTTATGAACATGTGTTGAAAGAACAACTTGAAATCAGCCAAGGGAAAGAGGCAGGGAATTTGTTGGAATGGCAGGATGTTCAGAAAATGAAATACTCTTGGAATGTTGCATCTGAAGTCATGAGACTATCACCCCCAGTGAGTGGTGCTTACAGAGAAGCCATAAAGGATTTCACCTATGCTGATTATAACATCCCTAAAGGGTGGAAGTTGCATTGGAATATTGGTTCAACACACATGGATCCAACACTCTTCTTGAATCCTGAAAATTTTGATCCTTCAAGGTTTGAAGGAGCAGGGCCTATACCCTATTCATACGTTCCATTTGGAGGGGGACCTCGAATATGTTTGGGGCAAGAGTTTGCTCGGCTAGAGATACTTGTGTTCATGCATAATATCGTGAAACGGTTCAAGTGGGATTTAGTGATTCCTGATGAGAAGTTTCTATATGATCCCATGCTAGAACCAGCAAAAGGACTTCCAATTCGACTTCAACCTCATAATTTCTAG 1446 0.408 MEVAKLVVLPAVLALFVLCLHFIAKTVKLRKHQVLHLPLGSFGWPIVGETFEFLRSGREGNIFRFIQERMNKYDSRVFKTSMLGDPMAVFCGPAGNKFLFSNENKNVQVWWPSSIRKLLRLSLVMKVGDEAKMTKKLLMGFLNPEALRNWLPKMDSIAQRHISTHWEGKEQVHVYPIVQLYTFKLACCLFLSIEDSILVSKLSSKFDEFLKGIIGFPINLPGTRFYRAMKAANEIRKEIKMILKKRKVDLEEKRVLPTQDLVSHLLVTPDPSGRFLTETEIIDNILLLLFAGNDTSRSALSSIMKYLGQLPEVYEHVLKEQLEISQGKEAGNLLEWQDVQKMKYSWNVASEVMRLSPPVSGAYREAIKDFTYADYNIPKGWKLHWNIGSTHMDPTLFLNPENFDPSRFEGAGPIPYSYVPFGGGPRICLGQEFARLEILVFMHNIVKRFKWDLVIPDEKFLYDPMLEPAKGLPIRLQPHNF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2380g00004 481 Gene3D Cytochrome P450 26 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2380g00004 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Gabi2380g00004 481 CDD CYP90-like 69 478 - -
Gabi2380g00004 481 PANTHER CYTOCHROME P450 26 33 464 - -
Gabi2380g00004 481 FunFam Taxadiene 5-alpha hydroxylase 28 479 - -
Gabi2380g00004 481 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2380g00004 481 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2380g00004 481 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2380g00004 481 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2380g00004 481 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2380g00004 481 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2380g00004 481 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2380g00004 481 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2380g00004 481 Pfam Cytochrome P450 40 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2380g00004 481 SUPERFAMILY Cytochrome P450 35 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2380g00004 Gabi-Chr2380 38084 41512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2380g00004 36 383 Cytochrome P450 AT5G36110 43.590 9.62e-101 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2380g00004 - K20667 gmx:100778139 810.061