Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2375g00025 ATGGAAACCTCTGATACACACCCATTGCTCTCTCTTGTACACCTTTGCATGCTTTGCTTGTTGTGCTTTATGGTCACAATCGAAGCCTCAAACGATAAGGTCTCTGCCATGTATGTTTTTGGAGACTCCACAGTAGACTCAGGAAACAACAACTACATAAACACGGCTTTCAAGAGCGATTTTCCACCCTATGGTAGAGATTTTGCCAACCAAGTTCCTACGGGAAGGTTCACAAATGGGAAGCTTGCCACTGATTTTCTTGCTTCATATCTAGGCCTGAAAGAGTTGTTGCCACCATATTTGGATCCAAATCTCAGTGATAAAGAGCTCATAACAGGAGTCAGTTTCGCCTCAGCTGGTTCTGGTTTTGACCCACTTACACCAACTCTGGGTAATGTGATTCCAATACCAAAGCAGTTGGAACATTTCAAAGAATGCAAAAAGAGGATGGAAGGTATGCTTGGTAAGCAAAGAACTGAAAATCATATGAATAATGCTGTATTTTTCATCAGTGCGGGAACAAATGACTTCGTTATTAATTACTTTACGTTGCCAATACGAAGAAAGAGCTTCACCCTCTTAAACTACGGCCAGTTCTTGCTTCAACACGTAAAAGATTTCATACAGAATTTATGGACAGAAGGTGCTAGAAAAATTGCTTTTGTTGGACTACCTCCAATGGGATGCTTGCCGATCATGATCACCTTCAATTCCGACAATGCCTTTCTTGATCGCAATTGTGTGGACAAGTATTCCGCTGTTGCAAGAGATCACAATGTGATGCTTCAACATGAATTGTTCTTAATGCAACTTAATTTCTCTAATCCTGCTGGTGCTAAGATCTCTTACATTGACATATATGGACCGTTGGCCAACATGATTCAAGAGCATGAAAAATTTGGGTTGGATGAGGTTGATAGTGGCTGTTGTGGAAGTGGTTACATCGAAACCACGTTTTTGTGTAATGAGGTTTCGTATGTTTGCTCTGATCCATCAAAGTATGTATTCTTTGATTCATTGCACCCTACGGAGAAGGTTTACCACAACCTATTCATGGCAGCCCGTCACAACATTGATGCACTTATCAACGGCTAG 1095 0.4119 METSDTHPLLSLVHLCMLCLLCFMVTIEASNDKVSAMYVFGDSTVDSGNNNYINTAFKSDFPPYGRDFANQVPTGRFTNGKLATDFLASYLGLKELLPPYLDPNLSDKELITGVSFASAGSGFDPLTPTLGNVIPIPKQLEHFKECKKRMEGMLGKQRTENHMNNAVFFISAGTNDFVINYFTLPIRRKSFTLLNYGQFLLQHVKDFIQNLWTEGARKIAFVGLPPMGCLPIMITFNSDNAFLDRNCVDKYSAVARDHNVMLQHELFLMQLNFSNPAGAKISYIDIYGPLANMIQEHEKFGLDEVDSGCCGSGYIETTFLCNEVSYVCSDPSKYVFFDSLHPTEKVYHNLFMAARHNIDALING 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2375g00025 364 Gene3D SGNH hydrolase 24 360 IPR036514 -
Gabi2375g00025 364 CDD SGNH_plant_lipase_like 36 364 IPR035669 -
Gabi2375g00025 364 PANTHER GDSL ESTERASE/LIPASE EXL3 22 350 - -
Gabi2375g00025 364 Pfam GDSL-like Lipase/Acylhydrolase 38 353 IPR001087 GO:0016788
Gabi2375g00025 364 FunFam GDSL esterase/lipase APG 26 358 - -
Gabi2375g00025 364 SUPERFAMILY SGNH hydrolase 163 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2375g00025 Gabi-Chr2375 248536 252400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2375g00025 9 350 Pollen Coat Proteome AT1G75910 32.951 3.39e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2375g00025 - - gmx:100779250 586.26