Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2375g00023 ATGGCTCTCCCTTCTTTTTCATTTCCATTCATTTCTTTGTTTGTTTTCTTCATTTTGAATGAAACTTCATCATGCTTAGCCATATTTAGCAACACTACCCCTCCCCATAGCCAGCTCTCAGTTGATTACTATGGCAAATCTTGTCCACAGCTAGAGAAGCTTATTGGCTCAGTCACCTCTCAACAATTCAAAGAATCACCTGTTTCTGGGCCTGCCACCATTCGCCTCCTATTCCACGATTGCTTTGTAGAAGGCTGTGATGCATCAATTTTAATAGCATCAAAGCCTGGAAGCAAGGATTTAGCAGAGAAAGATGCAGAGGATAATAGAGAATTGAGGGTGGAAGGTTTTGAGACTATAAGGAAAGCTAAGGAACTAGTTGAGAGCAAGTGCCCTGGTGTGGTGTCCTGTGCAGACATTCTTGTAATTGCAGCCAGGGATTATGTACACTTGCTAGGAGGGCCCTATTACCAAGTGAAGAAAGGAAGATGGGATGGAAAGATATCAATGGCATCAAGGGTGGGACCCAACATCCCTCATGCAAACTCAACCGTTGATCAACTCATCAAACTCTTCAACTCAAAAGGCTTAACTATACAGGACATGGTTGCTCTTTCGGGTGCCCACACAATCGGGTTCGCCCATTGCAAGCACTTTGTGACCCGACTCTACAATTACATGGGCAAGGGTCAACCCGACCGTTATATGAACCCAAAATTACTGCATGCACTGAGAATGTATTGTCCAAACTTTGGTGGAAACTCAGATATTGTTGCCCCATTTGATGCCACAACCCCATTCTTATTTGACAATGCTTATTATGTTAACTTGAACAACAACATGGGTTTGCTAGCCTCTGACCAGGCTTTGGTTTTGGACCCAAGAACCAAGCCACTGGTTCAAAACCTTGCTAAAGATAAGCAAAAGTTTTTTCAAGATTTTGCAGCTGCCATGGACAAATTGAGTTTGGTGAAAGTGGTAAGAGGGAAAAAGCATGGGGAGAAAAGAAGAGATTGTAGCATGCATATGTGA 1032 0.4302 MALPSFSFPFISLFVFFILNETSSCLAIFSNTTPPHSQLSVDYYGKSCPQLEKLIGSVTSQQFKESPVSGPATIRLLFHDCFVEGCDASILIASKPGSKDLAEKDAEDNRELRVEGFETIRKAKELVESKCPGVVSCADILVIAARDYVHLLGGPYYQVKKGRWDGKISMASRVGPNIPHANSTVDQLIKLFNSKGLTIQDMVALSGAHTIGFAHCKHFVTRLYNYMGKGQPDRYMNPKLLHALRMYCPNFGGNSDIVAPFDATTPFLFDNAYYVNLNNNMGLLASDQALVLDPRTKPLVQNLAKDKQKFFQDFAAAMDKLSLVKVVRGKKHGEKRRDCSMHM 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2375g00023 343 FunFam Peroxidase 42 189 - -
Gabi2375g00023 343 Pfam Peroxidase 59 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 SUPERFAMILY Heme-dependent peroxidases 38 341 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 CDD secretory_peroxidase 38 340 IPR033905 GO:0004601|GO:0042744
Gabi2375g00023 343 Gene3D Peroxidase, domain 2 179 321 - -
Gabi2375g00023 343 PANTHER - 26 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 Gene3D - 42 341 - -
Gabi2375g00023 343 PRINTS Plant peroxidase signature 260 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 PRINTS Plant peroxidase signature 316 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 PRINTS Plant peroxidase signature 276 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 FunFam Peroxidase 179 321 - -
Gabi2375g00023 343 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 PRINTS Haem peroxidase superfamily signature 262 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 ProSiteProfiles Plant heme peroxidase family profile. 38 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2375g00023 343 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Gabi2375g00023 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2375g00023 Gabi-Chr2375 227989 230603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2375g00023 7 343 Peroxidase AT2G34060 61.404 1.80e-157 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2375g00023 K00430 - gmx:100777463 563.918