Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2367g00011 ATGGCTATGCTTCTAGATGCTGTTGTTGGAGCTTTGGTTGGGGAACTGCTGAGTACTGTTTTAGAAATGAAGGACAAGGCTGTTAAGTTCACACCAACTCTGCAAAAATTGCAGTCCACCCTGGAAGCAATAGGACCAACGGTTAAAGAAAGAGAAGATCTTTACAGGAAATTGAATCGGCCAGAGAAGGAAACGAGTACGCTGATCGATCAGATGAAGAGTGGCAAGGACCTTGTTCTCAAGTGTTCTGAAGTCCAGTGGTGGAACTGCTGCTATAAAGCAGATTACCAAGAGGAACTTGAAGAATTGAATGCGTCGATTTTCAGTTTCTTTAATCTGAATTTGCAAATTCAGATAGCGAGGGATGGTGCTGAGGTACTCGTGGAGGTGAGAGAGATTCGTACGGAGATCAGAAATATTGTTCCAAGGAATGAAATAAGGGGCGTGTGCTCGCCTCCTAAACCCCCTGAGTTTACTGTTGGGTTGGATGTTCCTATGAATGAGTTGAAGCTGAAGTTGCTTCAGGATCAGATTAGTGTCTCGGTTCTCACGGTGACCGGTTCAGGAGGTTTGGGGAAGACTACATTAGCCAAAACGTTATGTTGGGATGACCAAGTCAAAGATAAATTCAAGGAAAATATCTTCTTTGTCACCTTTGGGAAAACACCCAAGTTGAATACCATAGTGCAGAGACTGTTTCAACACAAAGGTTACCAGGAGCCTGAGTTTCAAAATGATGAAGACATGGTCAACCAATTGGAACATTTGCTAGGACAGATTGTGAAAAGCCCAATACTGATAGTCCTGGATGATGTTTGGACAGGATCGGAATCTCTTGTTGAGAAATTTGTGTTCCAGATCCCAAACTACAAGATTTTAGTGACATCAAGATTCGCAATTAGAAGATTTGGCCCTCTATACGTCTTGAAACCCCTTGGTGATGCAGATGCTATAAATCTATTTCACCACTCTGCATCACTGAATCAAAGCAGCTCTGATATTCCTCATGATGATGTGATTAAGATAGTAAGAGGCTGTGGTGGTTTTCCCTTGGCCCTTAGAATGAGTGGGAGTTCACTGAGTCAAGAGAATCCGGTGTTCTGGCACAACAGGGCGAGGAAATTGTCCGAGGGTCATTCAATTCTTGATTCTAGTAGCGATGTGCTTGATTGTCTACAAAACATCTTCGATGTCTTGGATCCTAAGGTCATTGAGTGCTTCAGAGACCTAGGCTTATTTCCTGAAGGCCAAAGGATCCCTGCTGCTGCTCTTGTTGATATGTGGGCAGAACTGCATCGAGAAGATGAGGCCAATGCAATGGAGAAAATTTATGAACAAGTCAACCTAAACATGGCTGATATTTTTGTTACAAGGAAAGTTGCAAGTGGCACAATTGACTACAAATACCATTATGTCACGCAGCATGGTCTTCTTCGGGAGCTAGCTATCTGTCAAACTAGCCAGGAGCTAGTGGAGAAGAGGAATAGACTAATTATCGACATAAGTGGAAATAATGTTCCAGAATGGTGGAATGGAGGGAATGAGTATCACATTGCAGCCCGCATATTATCCATATCAACAGATGAAGCGTTCACTTCAGAATGGTGCAACTTGCAGCCAACTGAAGTTGAGGTTCTAGTGTTGAACCTTCGACAAAAGAAGTGCAAGCTACCAATGTTCATGAAGAAAATGAATAAATTAAAAGTTTTGGTAATCACAAATTATGACTTCCACCTTGCTGACTTGGAGAATTTTGAGCTGCTTGGTTATCTATCTGGTCTTAAACGAATCAGATTAGAGAAGGTTTCAATTCCTTTCCTCTGCCAGACTGGAATGCCATTGAAGAATCTGCAGAAGTTTTCTATTTTTATGTGCAATGTGAATGAAGCATTTAGAAACTGTGATATCCAAGTTTCAGATATGCTGCCAAATTTGGTGGAGATGAACATTGACTACTGCATTATGGTGGAATTACCAGTTGGTTTTTCTAATATTGTCTTCTTAAAGAAGCTCAGTATTACAAACTGCCATAAGCTTTCAGCACTTCCTGAAGGAATTGGAAATTTGGTCAATTTGGAAACACTAAGGCTTAGTTCATGTACTGATTTAGAAGAGTTGCCAGACTCAATTACAAGCCTTCAAAACCTTAAATTTCTTGACATCTCTGACTGCATAATGCTTAGTAAGTTACCTGAGAAAATGGGCGAGTTACGTAATTTAGAAAGGATCAATGTCTGCGGTTGTTCGAGTTTAAGAGAATTACCATTCTCAATCAAGGACCTTGGGAGCTTAAGGGATGTGGTATGTGATGAAGAGAGGGCTGCATTATGGGAACCTTTCAAAACCATCCTTAGTGATCTAAAGCTAGAGGAGGTACAAGTTGATATGGACTTAAGTTGGCTTTTATAA 2409 0.4114 MAMLLDAVVGALVGELLSTVLEMKDKAVKFTPTLQKLQSTLEAIGPTVKEREDLYRKLNRPEKETSTLIDQMKSGKDLVLKCSEVQWWNCCYKADYQEELEELNASIFSFFNLNLQIQIARDGAEVLVEVREIRTEIRNIVPRNEIRGVCSPPKPPEFTVGLDVPMNELKLKLLQDQISVSVLTVTGSGGLGKTTLAKTLCWDDQVKDKFKENIFFVTFGKTPKLNTIVQRLFQHKGYQEPEFQNDEDMVNQLEHLLGQIVKSPILIVLDDVWTGSESLVEKFVFQIPNYKILVTSRFAIRRFGPLYVLKPLGDADAINLFHHSASLNQSSSDIPHDDVIKIVRGCGGFPLALRMSGSSLSQENPVFWHNRARKLSEGHSILDSSSDVLDCLQNIFDVLDPKVIECFRDLGLFPEGQRIPAAALVDMWAELHREDEANAMEKIYEQVNLNMADIFVTRKVASGTIDYKYHYVTQHGLLRELAICQTSQELVEKRNRLIIDISGNNVPEWWNGGNEYHIAARILSISTDEAFTSEWCNLQPTEVEVLVLNLRQKKCKLPMFMKKMNKLKVLVITNYDFHLADLENFELLGYLSGLKRIRLEKVSIPFLCQTGMPLKNLQKFSIFMCNVNEAFRNCDIQVSDMLPNLVEMNIDYCIMVELPVGFSNIVFLKKLSITNCHKLSALPEGIGNLVNLETLRLSSCTDLEELPDSITSLQNLKFLDISDCIMLSKLPEKMGELRNLERINVCGCSSLRELPFSIKDLGSLRDVVCDEERAALWEPFKTILSDLKLEEVQVDMDLSWLL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2367g00011 802 Gene3D - 312 394 IPR042197 -
Gabi2367g00011 802 Gene3D - 395 482 IPR036388 -
Gabi2367g00011 802 PRINTS Disease resistance protein signature 182 197 - -
Gabi2367g00011 802 PRINTS Disease resistance protein signature 711 727 - -
Gabi2367g00011 802 PRINTS Disease resistance protein signature 346 360 - -
Gabi2367g00011 802 PRINTS Disease resistance protein signature 259 273 - -
Gabi2367g00011 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 410 IPR027417 -
Gabi2367g00011 802 Gene3D Ribonuclease Inhibitor 513 775 IPR032675 -
Gabi2367g00011 802 SUPERFAMILY L domain-like 499 765 - -
Gabi2367g00011 802 Gene3D - 143 302 IPR027417 -
Gabi2367g00011 802 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Gabi2367g00011 802 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 801 IPR039203 GO:0050832
Gabi2367g00011 802 Pfam NB-ARC domain 165 376 IPR002182 GO:0043531
Gabi2367g00011 802 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 138 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2367g00011 Gabi-Chr2367 227990 234615 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2367g00011 160 758 WRKY Transcription Factor Family AT5G45050 22.186 2.09e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2367g00011 - - gmx:100812310 1045.03