Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2366g00023 ATGGGATCATCATTCAAGCCCAACTCATGCACCAGAAAAACCCCACATAGATTAGAAACCAAGAACTTGTCATACAAATTGTGCAGCCAACTTGATGAATATAGAAGTCTTTGTTTTGGCTCAAATCCTAGGAGAGGTGCTAAGTTCATTTTGAAGGATGTAAATTGTGAGGCAAGGCCAGCAGAGTTAACTGCTATTGCTGGTCCTAGTGGAGCTGGAAAAACCACACTGCTTGAAATTCTTGCTGGGAGAATAACCCCATGTAGAGTGTCTGGCCAAGTGCTGGTCAATCATAGGCCTATGGAAGTGAACCAGTTCAGAAGAACATCAGGGTATGTTACACAGGAAGATGCTTTGTTCCCATCACTTACAGTTAGAGAGACACTCATGTATAGTGCTCTTCTGAGGCTTCCTGGGGGGAGAAAACTTGCTGATATCAGAGTTGGAGAATTGATGAAGGAGCTTGGGTTGGATCATATTGCAGATTCAAGAATTGGTGGTGGATCAAACCATGGCATATCGGGTGGGGAAATGCGTAGAGTTTCCATTGGTGTTGACTTGGTTCATGACCCTGCAGTTATTTTGATTGATGAACCAACTTCAGGGTTGGATTCAGCATCAGCTCTTAACGTAGTCTCATTGCTTAGACTAATGGCAGTTAATCAAGGTAAGACAATTGTTTTAACTATCCACCAACCTGGTTTTCGAATCTTAGAGCTATTTGATGGCCTCATTTTGCTGTCTGATGGATTTGTCATGCATAATGGATCATTGAATCTTCTTGAGGCAAGGCTCAAGTTAGCTGGGCATCACATTCCCCACCATGTCAATGTCCTCGAATTTGCTCTTGATGTCATGGAAAGCTTGGTTATACATACTTCAGAATATGGGAACAACCAATTTCTTCTCAAAGACAAAGAGCACCAAGATCACAAGATGAGGAAGCAGTGCTCTAAGATTGTCAAAGAAAAGGCTCTTTTGTACTCAAATTCTCCAATGGGGGAGATTTTAATCCTAGGACAAAGATTTTGCTTCAACATATTCAGGACCAAGCAACTCTTTGTAGCCAGGGTCCTACAGGCCATAGTAGCTGGATTTTTACTGGGGACCATATTTTTGAATGATGGCAGCCAACAAAGTCAAGTAGCATTGCAAACAAGAAGTGGCTTTTTTGCTTTCAGCCTTACCTTTTTGTTATCATCAACAACAGAAGGCCTACCTATTTTCTTGGAGGAGAGAAGGACTTTGATGAGAGAGACCTCGAGAGGAGCTTATAGAGTTTCTTCCTATGTTTTAGCAAATACCCTTGTGTTTCTTCCTTTCCTTCTGATGGTTGGTCTTCTGTACACTACTCCAGTTTATTGGCTTGTAGGATTAAGGAAAGACATTGAAGGTTTCCTTTACTTCTCCTTAGTGGTTTGGTTGGTCCTACTCATGTCAAATTCTCTCGTGGCTTGTTTCAGCGCTCTAGTGCCAAATTTCATCCTAGGGACCTCGGTGATTGCTGGTCTAATGGGGTCTTTCTTTCTATTTTCAGGGTATTTCATATCAAAGGAAAAAATACCCAGTTACTGGATCTTTATGCACTATTTGAGCCTATTCAAGTATCCATTTGAATGCCTCATGATAAATGAGTATGGAGGAGAGCAAGGGAAAATTAGATGCATAGAAATTAGTAATGGAGAATGCATATTACATGGAGTTGAGTTCTTAAGACAACAGGGTCTGAAAGAGTCACAAAAATGGACCAATTTGGCTGTAATGTTGGGCTTCATAATGGGGTATAGAGTGCTTAGCTTTTTTATTCTTTGGTCCAGATGTTATACAAGAAAATAG 1836 0.4096 MGSSFKPNSCTRKTPHRLETKNLSYKLCSQLDEYRSLCFGSNPRRGAKFILKDVNCEARPAELTAIAGPSGAGKTTLLEILAGRITPCRVSGQVLVNHRPMEVNQFRRTSGYVTQEDALFPSLTVRETLMYSALLRLPGGRKLADIRVGELMKELGLDHIADSRIGGGSNHGISGGEMRRVSIGVDLVHDPAVILIDEPTSGLDSASALNVVSLLRLMAVNQGKTIVLTIHQPGFRILELFDGLILLSDGFVMHNGSLNLLEARLKLAGHHIPHHVNVLEFALDVMESLVIHTSEYGNNQFLLKDKEHQDHKMRKQCSKIVKEKALLYSNSPMGEILILGQRFCFNIFRTKQLFVARVLQAIVAGFLLGTIFLNDGSQQSQVALQTRSGFFAFSLTFLLSSTTEGLPIFLEERRTLMRETSRGAYRVSSYVLANTLVFLPFLLMVGLLYTTPVYWLVGLRKDIEGFLYFSLVVWLVLLMSNSLVACFSALVPNFILGTSVIAGLMGSFFLFSGYFISKEKIPSYWIFMHYLSLFKYPFECLMINEYGGEQGKIRCIEISNGECILHGVEFLRQQGLKESQKWTNLAVMLGFIMGYRVLSFFILWSRCYTRK 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2366g00023 611 FunFam ABC transporter G family member 10 35 280 - -
Gabi2366g00023 611 Pfam ABC-2 type transporter 231 323 IPR043926 GO:0140359
Gabi2366g00023 611 CDD ABCG_EPDR 17 256 - -
Gabi2366g00023 611 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 11 597 - -
Gabi2366g00023 611 Pfam ABC transporter 51 201 IPR003439 GO:0005524
Gabi2366g00023 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 266 IPR027417 -
Gabi2366g00023 611 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524|GO:0016887
Gabi2366g00023 611 Gene3D - 39 275 IPR027417 -
Gabi2366g00023 611 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 274 IPR003439 GO:0005524
Gabi2366g00023 611 SMART AAA_5 60 251 IPR003593 GO:0016887
Gabi2366g00023 611 Pfam ABC-2 type transporter 336 546 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2366g00023 Gabi-Chr2366 320018 321868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2366g00023 12 261 Calmodulin-binding Proteins AT2G36910 26.277 2.46e-10 62.0