Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2362g00025 ATGGGCAACAGTGAGGAAGAGAAATATACTAAGACTGAAAAGCCTTCTTCACCTGTGACAATGGATCAGGCCAATCAGACTAACCAGACCAATATTCACGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTTGCCATGCCACCATACTACAACTCAGCTGTGGCTTCTGGTCATGCTCCTCATCCGTACATGTGGGGACCACCGCAGCCTATGATGCCTCCTTATGGACCTCCTTATGCTGCAATTTATTCACATGGTGGGGTTTATGCTCACCCTGCCGCTGTTCCAGTTGCTGGGGGGACTCCTTTAAGCATAGAGACACCACCCAAAACATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGGGTTTGATGGACTTGCAATGACAATAGGCAATGGCCATGCTGAGAGTGCAGAGCATGGGGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACCAGAAGGAAAAGAAGCAGTGAGGGAACACCAACCACTGCAGATGGAGAAGGGAAAACTGAGATACAAGGTAGTCCAGTTTCCAAAGAAACTGCAGATTCTAATAAGGTGATGTCAGTTGCCCCTGCCAGTGTTACAGCAAAATTAATTGAACCTGTAGTGTCTTCGGGTATGACCACCTCACTGGAGCTGAGAAATCCTTCCAGTGTTCATTCTAAACCAAATCCCACAGGTGCCCCACAACCTTGTCCAGTAGTGCCTGCAGAAAATTGGTTACAGAATGAGCGCGAGCTGAAACGTGAGAGGAGGAAACAGTCAAATCGAGAATCTGCAAGAAGGTCCAGATTAAGGAAGCAGGCTGAGACTGAAGAACTGGCACGAAAAGTTGAATCCTTGAATACTGAGAATGTGTCACTGAAATCAGAAATAGGTCGACTGACTGAAAGTTCTGAAAAACTGAGGGTGGAAAATTCTACATTAAGGGAAAAACTTAAAAGTGCTCGACTGGGACAAACAGGAGAGAGAATTTTGAACAGCATTGACAGCCTGAGGGCTACACCTGTAAGTACAGAAAATTTACTATCAAGAGTTAATAATTCGGGTTCTAATGATAGAACTGGGGAGGATGAGAATGGATATTCTGACAACAAACCAAACTCTGGTGCAAAGCTGCGTCAACTACTGGATACAAGTCCCAGAGCTGATGCTGTGGCAGCTGGTTGA 1251 0.4588 MGNSEEEKYTKTEKPSSPVTMDQANQTNQTNIHVYPDWAAMQAYYGPRVAMPPYYNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAIYSHGGVYAHPAAVPVAGGTPLSIETPPKTSGNTDQGLMKKLKGFDGLAMTIGNGHAESAEHGAENRLSQSVDTEGSSDGSDGNTAGANQTRRKRSSEGTPTTADGEGKTEIQGSPVSKETADSNKVMSVAPASVTAKLIEPVVSSGMTTSLELRNPSSVHSKPNPTGAPQPCPVVPAENWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNTENVSLKSEIGRLTESSEKLRVENSTLREKLKSARLGQTGERILNSIDSLRATPVSTENLLSRVNNSGSNDRTGEDENGYSDNKPNSGAKLRQLLDTSPRADAVAAG 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2362g00025 416 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Gabi2362g00025 416 Gene3D - 274 328 - -
Gabi2362g00025 416 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 380 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gabi2362g00025 416 MobiDBLite consensus disorder prediction 236 303 - -
Gabi2362g00025 416 MobiDBLite consensus disorder prediction 144 214 - -
Gabi2362g00025 416 SUPERFAMILY Leucine zipper domain 274 330 IPR046347 GO:0003700|GO:0006355
Gabi2362g00025 416 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 273 336 IPR004827 GO:0003700|GO:0006355
Gabi2362g00025 416 MobiDBLite consensus disorder prediction 14 28 - -
Gabi2362g00025 416 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 278 293 IPR004827 GO:0003700|GO:0006355
Gabi2362g00025 416 Pfam Disordered region downstream of MFMR 121 252 - -
Gabi2362g00025 416 SMART brlzneu 271 335 IPR004827 GO:0003700|GO:0006355
Gabi2362g00025 416 Pfam bZIP transcription factor 271 333 IPR004827 GO:0003700|GO:0006355
Gabi2362g00025 416 Coils Coil 264 284 - -
Gabi2362g00025 416 CDD bZIP_plant_GBF1 276 324 IPR045314 GO:0003700|GO:0006355
Gabi2362g00025 416 MobiDBLite consensus disorder prediction 236 252 - -
Gabi2362g00025 416 Coils Coil 291 325 - -
Gabi2362g00025 416 MobiDBLite consensus disorder prediction 269 303 - -
Gabi2362g00025 416 MobiDBLite consensus disorder prediction 367 402 - -
Gabi2362g00025 416 MobiDBLite consensus disorder prediction 150 214 - -
Gabi2362g00025 416 MobiDBLite consensus disorder prediction 367 416 - -
Gabi2362g00025 416 FunFam G-box binding factor 3 274 329 - -
Gabi2362g00025 416 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2362g00025 Gabi-Chr2362 201746 207731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2362g00025 1 416 bZIP Transcription Factor Family AT2G46270 50.228 2.38e-115 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi2362g00025 MFMR_assoc 9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2362g00025 K09060 - gmx:778133 665.225