Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2362g00024 ATGGGCAACAGTGAGGAAGAGAAATATACTAAGACTGAAAAGCCTTCTTCACCTGTGACAATGGATCAGGCCAATCAGACTAACCAGACCAATATTCACGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTTGCCATGCCACCATACTACAACTCAGCTGTGGCTTCTGGTCATGCTCCTCATCCGTACATGTGGGGACCACCGCAGCCTATGATGCCTCCTTATGGACCTCCTTATGCTGCAATTTATTCACATGGTGGGGTTTATGCTCACCCTGCCGCTGTTCCAGTTGGGCCACATCCACATAATCAAGGAGTTTCATCTTCACCTGCTGCTGGGGGGACTCCTTTAAGCATAGAGACACCACCCAAAACATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGGGTTTGATGGACTTGCAATGACAATAGGCAATGGCCATGCTGAGAGTGCAGAGCATGGGGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACCAGAAGGAAAAGAAGCAGTGAGGGAACACCAACCACTGATGGAGAAGGGAAAACTGAGATACAAGGTAGTCCAGTTTCCAAAGAAACTGCAGATTCTAATAAGGTGATGTCAGTTGCCCCTGCCAGTGTTACAGCAAAATTAATTGAACCTGTAGTGTCTTCGGGTATGACCACCTCACTGGAGCTGAGAAATCCTTCCAGTGTTCATTCTAAACCAAATCCCACAGGTGCCCCACAACCTTGTCCAGTAGTGCCTGCAGAAAATTGGTTACAGAATGAGCGCGAGCTGAAACGTGAGAGGAGGAAACAGTCAAATCGAGAATCTGCAAGAAGGTCCAGATTAAGGAAGCAGGCTGAGACTGAAGAACTGGCACGAAAAGTTGAATCCTTGAATACTGAGAATGTGTCACTGAAATCAGAAATAGGTCGACTGACTGAAAGTTCTGAAAAACTGAGGGTGGAAAATTCTACATTAAGGGAAAAACTTAAAAGTGCTCGACTGGGACAAACAGGAGAGAGAATTTTGAACAGCATTGACAGCCTGAGGGCTACACCTGTAAGTACAGAAAATTTACTATCAAGAGTTAATAATTCGGGTTCTAATGATAGAACTGGGGAGGATGAGAATGGATATTCTGACAACAAACCAAACTCTGGTGCAAAGCTGCGTCAACTACTGGATACAAGTCCCAGAGCTGATGCTGTGGCAGCTGGTTGA 1290 0.4589 MGNSEEEKYTKTEKPSSPVTMDQANQTNQTNIHVYPDWAAMQAYYGPRVAMPPYYNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAIYSHGGVYAHPAAVPVGPHPHNQGVSSSPAAGGTPLSIETPPKTSGNTDQGLMKKLKGFDGLAMTIGNGHAESAEHGAENRLSQSVDTEGSSDGSDGNTAGANQTRRKRSSEGTPTTDGEGKTEIQGSPVSKETADSNKVMSVAPASVTAKLIEPVVSSGMTTSLELRNPSSVHSKPNPTGAPQPCPVVPAENWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNTENVSLKSEIGRLTESSEKLRVENSTLREKLKSARLGQTGERILNSIDSLRATPVSTENLLSRVNNSGSNDRTGEDENGYSDNKPNSGAKLRQLLDTSPRADAVAAG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2362g00024 429 MobiDBLite consensus disorder prediction 380 429 - -
Gabi2362g00024 429 MobiDBLite consensus disorder prediction 107 137 - -
Gabi2362g00024 429 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Gabi2362g00024 429 MobiDBLite consensus disorder prediction 249 339 - -
Gabi2362g00024 429 Pfam Disordered region downstream of MFMR 135 265 - -
Gabi2362g00024 429 MobiDBLite consensus disorder prediction 249 265 - -
Gabi2362g00024 429 MobiDBLite consensus disorder prediction 14 28 - -
Gabi2362g00024 429 Pfam bZIP transcription factor 284 346 IPR004827 GO:0003700|GO:0006355
Gabi2362g00024 429 MobiDBLite consensus disorder prediction 104 139 - -
Gabi2362g00024 429 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 393 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gabi2362g00024 429 MobiDBLite consensus disorder prediction 282 319 - -
Gabi2362g00024 429 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 291 306 IPR004827 GO:0003700|GO:0006355
Gabi2362g00024 429 MobiDBLite consensus disorder prediction 158 227 - -
Gabi2362g00024 429 CDD bZIP_plant_GBF1 289 337 IPR045314 GO:0003700|GO:0006355
Gabi2362g00024 429 MobiDBLite consensus disorder prediction 164 227 - -
Gabi2362g00024 429 Gene3D - 287 341 - -
Gabi2362g00024 429 Coils Coil 304 338 - -
Gabi2362g00024 429 SUPERFAMILY Leucine zipper domain 287 343 IPR046347 GO:0003700|GO:0006355
Gabi2362g00024 429 Coils Coil 277 297 - -
Gabi2362g00024 429 MobiDBLite consensus disorder prediction 1 28 - -
Gabi2362g00024 429 MobiDBLite consensus disorder prediction 380 415 - -
Gabi2362g00024 429 SMART brlzneu 284 348 IPR004827 GO:0003700|GO:0006355
Gabi2362g00024 429 FunFam G-box binding factor 3 287 342 - -
Gabi2362g00024 429 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 286 349 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2362g00024 Gabi-Chr2362 201746 207731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2362g00024 1 429 bZIP Transcription Factor Family AT2G46270 51.481 3.65e-118 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi2362g00024 MFMR_assoc 4.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2362g00024 K09060 - gmx:778133 677.167