Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2362g00022 ATGGGCAACAGTGAGGAAGAGAAATATACTAAGACTGAAAAGCCTTCTTCACCTGTGACAATGGATCAGGCCAATCAGACTAACCAGACCAATATTCACGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTTGCCATGCCACCATACTACAACTCAGCTGTGGCTTCTGGTCATGCTCCTCATCCGTACATGTGGGGACCACCGCAGCCTATGATGCCTCCTTATGGACCTCCTTATGCTGCAATTTATTCACATGGTGGGGTTTATGCTCACCCTGCCGCTGTTCCAGTTGGGCCACATCCACATAATCAAGGAGTTTCATCTTCACCTGCTGCTGGGGGGACTCCTTTAAGCATAGAGACACCACCCAAAACATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGGGTTTGATGGACTTGCAATGACAATAGGCAATGGCCATGCTGAGAGTGCAGAGCATGGGGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACCAGAAGGAAAAGAAGCAGTGAGGGAACACCAACCACTGCAGATGGAGAAGGGAAAACTGAGATACAAGGTAGTCCAGTTTCCAAAGAAACTGCAGATTCTAATAAGGTGATGTCAGTTGCCCCTGCCAGTGTTACAGCAAAATTAATTGAACCTGTAGTGTCTTCGGGTATGACCACCTCACTGGAGCTGAGAAATCCTTCCAGTGTTCATTCTAAACCAAATCCCACAGGTGCCCCACAACCTTGTCCAGTAGTGCCTGCAGAAAATTGGTTACAGAATGAGCGCGAGCTGAAACGTGAGAGGAGGAAACAGTCAAATCGAGAATCTGCAAGAAGGTCCAGATTAAGGAAGCAGGCTGAGACTGAAGAACTGGCACGAAAAGTTGAATCCTTGAATACTGAGAATGTGTCACTGAAATCAGAAATAGGTCGACTGACTGAAAGTTCTGAAAAACTGAGGGTGGAAAATTCTACATTAAGGGAAAAACTTAAAAGTGCTCGACTGGGACAAACAGGAGAGAGAATTTTGAACAGCATTGACAGCCTGAGGGCTACACCTGTAAGTACAGAAAATTTACTATCAAGAGTTAATAATTCGGGTTCTAATGATAGAACTGGGGAGGATGAGAATGGATATTCTGACAACAAACCAAACTCTGGTGCAAAGCTGCGTCAACTACTGGATACAAGTCCCAGAGCTGATGCTGTGGCAGCTGGTTGA 1293 0.4594 MGNSEEEKYTKTEKPSSPVTMDQANQTNQTNIHVYPDWAAMQAYYGPRVAMPPYYNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAIYSHGGVYAHPAAVPVGPHPHNQGVSSSPAAGGTPLSIETPPKTSGNTDQGLMKKLKGFDGLAMTIGNGHAESAEHGAENRLSQSVDTEGSSDGSDGNTAGANQTRRKRSSEGTPTTADGEGKTEIQGSPVSKETADSNKVMSVAPASVTAKLIEPVVSSGMTTSLELRNPSSVHSKPNPTGAPQPCPVVPAENWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNTENVSLKSEIGRLTESSEKLRVENSTLREKLKSARLGQTGERILNSIDSLRATPVSTENLLSRVNNSGSNDRTGEDENGYSDNKPNSGAKLRQLLDTSPRADAVAAG 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2362g00022 430 Coils Coil 305 339 - -
Gabi2362g00022 430 Coils Coil 278 298 - -
Gabi2362g00022 430 Gene3D - 288 342 - -
Gabi2362g00022 430 MobiDBLite consensus disorder prediction 283 317 - -
Gabi2362g00022 430 MobiDBLite consensus disorder prediction 250 266 - -
Gabi2362g00022 430 MobiDBLite consensus disorder prediction 381 416 - -
Gabi2362g00022 430 FunFam G-box binding factor 3 288 343 - -
Gabi2362g00022 430 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 292 307 IPR004827 GO:0003700|GO:0006355
Gabi2362g00022 430 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 394 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gabi2362g00022 430 MobiDBLite consensus disorder prediction 164 228 - -
Gabi2362g00022 430 MobiDBLite consensus disorder prediction 107 137 - -
Gabi2362g00022 430 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Gabi2362g00022 430 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 287 350 IPR004827 GO:0003700|GO:0006355
Gabi2362g00022 430 MobiDBLite consensus disorder prediction 381 430 - -
Gabi2362g00022 430 Pfam Disordered region downstream of MFMR 135 266 - -
Gabi2362g00022 430 SMART brlzneu 285 349 IPR004827 GO:0003700|GO:0006355
Gabi2362g00022 430 MobiDBLite consensus disorder prediction 14 28 - -
Gabi2362g00022 430 MobiDBLite consensus disorder prediction 104 139 - -
Gabi2362g00022 430 Pfam bZIP transcription factor 285 347 IPR004827 GO:0003700|GO:0006355
Gabi2362g00022 430 MobiDBLite consensus disorder prediction 250 317 - -
Gabi2362g00022 430 SUPERFAMILY Leucine zipper domain 288 344 IPR046347 GO:0003700|GO:0006355
Gabi2362g00022 430 MobiDBLite consensus disorder prediction 158 228 - -
Gabi2362g00022 430 MobiDBLite consensus disorder prediction 1 28 - -
Gabi2362g00022 430 CDD bZIP_plant_GBF1 290 338 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2362g00022 Gabi-Chr2362 201729 207731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2362g00022 1 430 bZIP Transcription Factor Family AT2G46270 51.136 1.60e-117 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi2362g00022 MFMR_assoc 9.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2362g00022 K09060 - gmx:778133 672.544