Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2359g00043 ATGAGTAAGACTGAATTATCAAGGATGAAGCCACCACTTGTTCCGTTGGCAACCCTGATTGGCCGTGAGCTACGAAATGAAAAAATTGAGAAGCCTTTTGTCAAGTGTGGACAGGCTGGCTTGGCGAAGAAAGGAGAAGATTACTTTCTAATCAAGACAGATTGCCAGAGGATTCCTGGGGATTCATCAACACTGTTTTCTGTCTTCGCGATCTTTGATGGGCATAATGGTATATCCGCTGCAATTTTTGCAAAGGAAAACATACTAAGTTATGTTATGAGTGCGATACCACAAGATATCAGCAGGGATGAGTGGCTGCAAGCTCTGCCTCGGGCTCTAGTTGTTGGTTTTGTGAAAACTGACATAGAATTTCAGCAAAAAGGGGAAACTTCTGGAACAACAGCTACATTTGTTGTGGTTGATGGATGGACTGTTACTGTTGCATCTGTTGGAGATTCCCGTTGCATATTAGATACCCAGGGAGGTGTTGTTTCTCTTTTGACGGTTGACCACAGATTGGAAGAAAATGTAGAAGAGAGGGAACGAGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATATATATGGAGGCAATGAGGTAGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTTTCTAGATCTATTGGTGACACAGATGTGGGAGAATATATTGTGCCAATACCTCACGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGGCTTATTATAGCTTCCGATGGTATTTGGGATGCTTTATCTTCTGATATGGCTGCCAAGTCATGTCGGGGTCTACCTGCAGAACTTTCTGCAAAGCTGGTGGTAAAGGAAGCTCTAAGGTCAAGAGGGCTGAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCGGACCATCCTGTGTTACCAACAATTCCAAGAAAGAAACATAATATGCTTACTTCCCTTCTCTTTGGAAAGAAATCTCTAAACTCTACAAACAAAACTACTAATAAACTTTCTGCAGTTGGTGTTGTGGAGGAGTTGTTTGAAGAGGGCTCTGCAATGCTTACAGAGAGGCTGGGTAAGGATTTTCCATCTAATATGAATTCTGGGATTTTCCGCTGTGCGGTTTGTCAAGCAGATCAACCCCCTGGTGATGATTTATCAGTGAACTCTGGGCCTTTTTTCTCTCCAGCATCTAAGCCATGGGAAGGTCCTTTTCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGTGGGAACATGCATGATTCTACATTTGGATGGTGA 1293 0.4346 MSKTELSRMKPPLVPLATLIGRELRNEKIEKPFVKCGQAGLAKKGEDYFLIKTDCQRIPGDSSTLFSVFAIFDGHNGISAAIFAKENILSYVMSAIPQDISRDEWLQALPRALVVGFVKTDIEFQQKGETSGTTATFVVVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNIYGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELSAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPTIPRKKHNMLTSLLFGKKSLNSTNKTTNKLSAVGVVEELFEEGSAMLTERLGKDFPSNMNSGIFRCAVCQADQPPGDDLSVNSGPFFSPASKPWEGPFLCTNCQKKKDAMEGKSGNMHDSTFGW 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2359g00043 430 SUPERFAMILY PP2C-like 36 297 IPR036457 -
Gabi2359g00043 430 FunFam probable protein phosphatase 2C 5 35 302 - -
Gabi2359g00043 430 CDD PP2Cc 43 297 IPR001932 -
Gabi2359g00043 430 PANTHER PROTEIN PHOSPHATASE 46 296 IPR015655 GO:0004722|GO:0006470
Gabi2359g00043 430 Pfam Protein phosphatase 2C 62 265 IPR001932 -
Gabi2359g00043 430 Gene3D - 32 301 IPR036457 -
Gabi2359g00043 430 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Gabi2359g00043 430 SMART PP2C_SIG_2 50 297 IPR001932 -
Gabi2359g00043 430 SMART PP2C_4 23 295 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2359g00043 Gabi-Chr2359 291539 294911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2359g00043 1 419 PP2C-type Phosphatase Gene Family AT1G09160 77.327 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2359g00043 - - qsa:O6P43_007451 758.444