Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2359g00020 ATGAATGGGGCAGATGCACATAAGAGGAAGAGAATTGTCATCATTAGCGTCTCTACCTTCTTACTTGTGGCTATGGTCGTGGCCGTGACAGTTGGTGTCAACTTCACTAGTAATGGTTCCAATGATGATGATCAAAAGAACAATGAGAAGAAGAACCATGTATATTCCACCGTAAAAGCAGTCAAAACCCTTTGCCAACCCACCGATTACAAGAAAGAATGTGAGGAAAGCCTTAAAGCAGAGGCTGGGAACACCACTGACCCAAGAGAACTCATTAAAATTGCCTTCAATGCAACCATTACGAAAATCAGTAACGGACTCAAGAAAACCGATCTCTTGCACGAGGTTGAGAAGGAACCTAGAGCCAAAATGGCACTTGACACGTGCAAACAACTCATGGATCTTTCAATAGAGGAATTCACGAGGTCACTTGAGAGAATGGGAAATTTTGATCTCAACAATCTCGATAACATTCTCACGAGTTTAAAGGTTTGGCTCAGCGGTGCAGTGACTTACCAAGAGACTTGCTTGGATGGTTTTGATAACACCACAAGCGAAGCTGGTAAGAAGATGAAGAACATTTTAACGAGTACCATGCACATGAGTAGCAATGCTCTCGCCATCATTTCAGAACTCGCGAAAACTGTGTCGGAAATGAATTTGACAAGATCAGATGGTCGTCGTTTGATTCAGGATTCTGTGGATGATCAACAAGTTCTTGATCACGATGAGATTGAGCTAATTCCCTCATGGGCTGATAATGATGGTGCTGGTGTTCGTAGACTCCTTCACACAAGTCCACGCAAACTCAAGGCTCATGTGGTTGTAGCCAAAGATGGCAGCGGAAAGTTCAAGACCATCAACAAGGCATTGAAGCTGGTGCCCAAGAAGAACAAAAAGCCATTCGTGATCTACATCAAGGAGGGTGTTTATCATGAGTATGTTGAAGTTACCAGGGAAATGACACACGTGGTGTTTGTCGGCGATGGTCGCAGAAAGACACGAATCACTGGCAAGAAGAACTTCATAGATGGGTTTAACACTTACAGAACCCCCACAGTTGCTATTCAAGGAGATTACTTTGTGGCCATCAATATGGGGTTTGAGAATTCTGCTGGCCCCCACAAGCATCAAGCAGTAGCTATAAGGGTCCAAGCAGACAAGTCCATATTCTACAAATGCGCAATGGATGGGTATCAGGACACACTGTATGTTCACGCCATGCGCCAGTTCTATAGGGAATGTACCATTTCAGGTACCATAGACTTCATCTTTGGTGATGCAGTGGCTGTTTTCCAAAACTGCACTTTTGTGGTCCGAAAGCCAATGCAAAACCAGCAATGCATTGTGACCGCACAAGGGAGGAAGGAGAGGCACGAACCAACAGGAATAGTGATCCAAGGTGGTTCCATTGTGTCGAACCGTGGAGTGAAGTTTGACAGCAAGGCCTATCTAGCACGTCCATGGAAAAATTACTCAAGGACCATCTTCATGGACACCTACATTGAGGATTTGATTCAACAAGACGGTTATATGCCATGGCAAGGACCAGAGGGTCTTTCTGGTACGGACACTTGCTTCTATGCAGAGTATAACAACACTGGCCCTGGTTCAAACAAATCCAAGCGTGTAAAATGGCCTGGGATCAAGGCCCTCACATCAAAATCCGCACGTGGTTTCTTACCATCCACGTTCTTTAATGGTGATGATTGGATTAAGGTTACTAGGATTCCATACTCTTCTGGCGAGGCCTCTCCCAAGCACTAG 1767 0.4488 MNGADAHKRKRIVIISVSTFLLVAMVVAVTVGVNFTSNGSNDDDQKNNEKKNHVYSTVKAVKTLCQPTDYKKECEESLKAEAGNTTDPRELIKIAFNATITKISNGLKKTDLLHEVEKEPRAKMALDTCKQLMDLSIEEFTRSLERMGNFDLNNLDNILTSLKVWLSGAVTYQETCLDGFDNTTSEAGKKMKNILTSTMHMSSNALAIISELAKTVSEMNLTRSDGRRLIQDSVDDQQVLDHDEIELIPSWADNDGAGVRRLLHTSPRKLKAHVVVAKDGSGKFKTINKALKLVPKKNKKPFVIYIKEGVYHEYVEVTREMTHVVFVGDGRRKTRITGKKNFIDGFNTYRTPTVAIQGDYFVAINMGFENSAGPHKHQAVAIRVQADKSIFYKCAMDGYQDTLYVHAMRQFYRECTISGTIDFIFGDAVAVFQNCTFVVRKPMQNQQCIVTAQGRKERHEPTGIVIQGGSIVSNRGVKFDSKAYLARPWKNYSRTIFMDTYIEDLIQQDGYMPWQGPEGLSGTDTCFYAEYNNTGPGSNKSKRVKWPGIKALTSKSARGFLPSTFFNGDDWIKVTRIPYSSGEASPKH 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2359g00020 588 Gene3D - 267 583 IPR012334 -
Gabi2359g00020 588 Pfam Plant invertase/pectin methylesterase inhibitor 60 208 IPR006501 GO:0004857
Gabi2359g00020 588 FunFam Pectinesterase 57 213 - -
Gabi2359g00020 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 212 IPR035513 -
Gabi2359g00020 588 PANTHER PECTINESTERASE 15 573 - -
Gabi2359g00020 588 SUPERFAMILY Pectin lyase-like 271 581 IPR011050 -
Gabi2359g00020 588 CDD PMEI-like_3 63 214 - -
Gabi2359g00020 588 ProSitePatterns Pectinesterase signature 2. 417 426 IPR033131 -
Gabi2359g00020 588 Pfam Pectinesterase 273 569 IPR000070 GO:0030599|GO:0042545
Gabi2359g00020 588 NCBIfam pectinesterase inhibitor domain 57 212 IPR006501 GO:0004857
Gabi2359g00020 588 FunFam Pectinesterase 267 583 - -
Gabi2359g00020 588 SMART PMEI_2 56 208 IPR006501 GO:0004857
Gabi2359g00020 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 214 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2359g00020 Gabi-Chr2359 163621 165933 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2359g00020 5 582 Carbohydrate Esterase AT3G05610 49.400 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2359g00020 K01051 - gmx:100794799 879.011