Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2359g00017 ATGGGGATCGATCTTAAAGCCGGAGGTAAGAGCAAGAAGACGAAAAGAACAGCACCCAAGTCCAATGATATCTATCTCAAGCTCTTGGTCAAGCTTTATCGCTTCCTTGTTCGGAGAACTGGCAGCAAATTCAATGCTGTAATACTTAAGCGCTTGTTCATGAGCAAGGTTAACAAGCCTCCACTATCTTTGTCAAGGTTGATTAAGTATACCAAGGGGAAGGAAGATAAGATTTCCGTGGTGGTGGGGGCTATAACTGATGATATACGTGTTCATGAAGTTCCACCCCTAAAAGTTACAGCTCTCAGGTTTACAGAGACAGCTCGAGCAAGAATAGAGAAGGCAGGTGGTGAATGCTTGACCTTTGATCAGTTGGCTCTTAGGGCCCCTCTGGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAATGCTCGTGAAGCTGTGAAGCACTTTGGTCCTGCTCCTGGTGTGCCACACAGCCATACCAAGCCTTATGTGCGATCTAAGGGAAGGAAGTACGAGATGGCTAGAGGAAGAAGAAACAGTCGAGGATTTAGGGTTTGA 564 0.4663 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLIKYTKGKEDKISVVVGAITDDIRVHEVPPLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKYEMARGRRNSRGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2359g00017 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Gabi2359g00017 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Gabi2359g00017 187 FunFam 60S ribosomal protein L18 1 187 - -
Gabi2359g00017 187 Gene3D - 1 187 - -
Gabi2359g00017 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Gabi2359g00017 187 MobiDBLite consensus disorder prediction 150 187 - -
Gabi2359g00017 187 MobiDBLite consensus disorder prediction 167 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2359g00017 Gabi-Chr2359 145329 147591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2359g00017 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.957 7.81e-104 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2359g00017 K02883 - gmx:100791657 359.377