Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2359g00012 ATGAGTCGAGGAGGCGCAGTTGGTCCCAAGGGAAAGAAGAAGGGTGTGACATTCACCATTGACTGCGCGAAACCAGTGGAGGACAAGATCATGGACATTGCGTCTCTCGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAGGCCGGTGCTCTCGGCGATACTGTCTCTGTTACACGTGAGAAGTCCAAGATCACTGTTACTTCTGACAGCAACTTCTCCAAACGGTACCTCAAGTACTTGACAAAGAAGTATTTGAAGAAACACAACGTCCGGGACTGGCTGAGGGTGATTGCTTCTAACAAAGAAAGAAATGTTTATGAACTGAGGTACTTTAACATTGCTGAGAATGAAGGAGAGGAAGAAGATTAA 375 0.4613 MSRGGAVGPKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKERNVYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2359g00012 124 Gene3D - 7 124 IPR038526 -
Gabi2359g00012 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Gabi2359g00012 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Gabi2359g00012 124 PANTHER 60S RIBOSOMAL PROTEIN L22 5 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2359g00012 Gabi-Chr2359 103833 105646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2359g00012 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.097 3.27e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2359g00012 K02891 - jre:109006844 221.476