Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2358g00036 ATGTCAAGCACTGCTGGTCTCGTGATTCCATGCAAAGCTGCTGTTGCATGGCAAGCAGGGAAACCTTTGGTGATAGAACGCGTGGAGGTGGCTCCCCCACAGGTCATGGAAGTGAGGATCAAGGTTAAATATACCTCACTCTGCCATACTGATCTCTACTTCTGGGAGGCCAAGGGGCAAACTCCTCTGTTTCCCCGAATTTTCGGTCACGAGGCATCTGGAATTGTGGAGAGTGTTGGAGAAGGAGTCACAGACCTGCAGGTCGGGGATCATGTGCTTCCGGTATTCACTGGGGAATGTGGTGAGTGTCCACATTGCAAATCTGAGGAAAGCAACATGTGTGACCTGTTGAGGATCAATACAGACAGAGGAGTCATGCTTAGTGATGGTAAAAGCAGGTTCTCCATTAATGGTAACCCAATAAATCACTTTGTTGGCACATCCACTTTTAGTGAATACACTGTGATACATTCTGGCTGCTTAGCAAAGATCAATCCACAAGCACCTATGGATAAAGTCTGTGTCTTAAGTTGTGGCATCTCAACAGGATTAGGAGCAACTTTAAATGTTGCAAAACCAAAGAAGGGCTCTACTGTAGCAATCTTTGGTCTTGGAGCTGTTGGCCTTGCTGCTGCTGAGGGTGCAAGAATTGCTGGTGCATCTAGAATTATTGGAATTGATTTGAACCCAAAGAGGTTTGAGGAAGCCAAAAAATTTGGAGTAACTGAGTTTGTGAATCCCAAGGACTATGATAAGCCGGTTCAAAAGGTGATTGCAGATATGACTAATGGAGGAGTGGACAGAAGTATAGAGTGCACTGGAAACATCAATGCCATGATATCAGCTTTTGAATGTGTTCATGATGGGTGGGGTGTTGCTGTGCTTGTTGGAGTACCAACTAAGGACACAGTTTTCATGACCAAGCCTATTAATCTGCTCAACGAAAGAACACTTAGGGGGACTTTCTTTGGAAATTACAAGCCTAGGACTGACCTCCCATCTATTGTTGATATGTATATGAATAAGAAATTGGAACTGGACAAGTTTATAACCCATAGAGTTTCTTTCTCTGATATCAACAAGGCATTTGAATTAATGTTGAAAGGAGAGGGACTAAGGTGTATCATTAACATGGAAGACTAG 1143 0.4374 MSSTAGLVIPCKAAVAWQAGKPLVIERVEVAPPQVMEVRIKVKYTSLCHTDLYFWEAKGQTPLFPRIFGHEASGIVESVGEGVTDLQVGDHVLPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLSDGKSRFSINGNPINHFVGTSTFSEYTVIHSGCLAKINPQAPMDKVCVLSCGISTGLGATLNVAKPKKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPKRFEEAKKFGVTEFVNPKDYDKPVQKVIADMTNGGVDRSIECTGNINAMISAFECVHDGWGVAVLVGVPTKDTVFMTKPINLLNERTLRGTFFGNYKPRTDLPSIVDMYMNKKLELDKFITHRVSFSDINKAFELMLKGEGLRCIINMED 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2358g00036 380 FunFam Alcohol dehydrogenase class-P 183 321 - -
Gabi2358g00036 380 Gene3D - 19 370 - -
Gabi2358g00036 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 343 IPR036291 -
Gabi2358g00036 380 CDD alcohol_DH_plants 9 376 - -
Gabi2358g00036 380 Pfam Zinc-binding dehydrogenase 206 331 IPR013149 -
Gabi2358g00036 380 Pfam Alcohol dehydrogenase GroES-like domain 37 162 IPR013154 -
Gabi2358g00036 380 SUPERFAMILY GroES-like 4 186 IPR011032 -
Gabi2358g00036 380 PANTHER ALCOHOL DEHYDROGENASE 8 376 - -
Gabi2358g00036 380 SUPERFAMILY GroES-like 328 376 IPR011032 -
Gabi2358g00036 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Gabi2358g00036 380 Gene3D - 183 321 - -
Gabi2358g00036 380 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2358g00036 Gabi-Chr2358 311787 316993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2358g00036 37 380 Monolignol Biosynthesis Gene Families AT1G72680 23.429 1.22e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2358g00036 K18857 - zju:107426564 688.337