Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2358g00029 ATGCAAGTGTTCTACTACTTTATTAAGTCAGAGAACAACCCTGAGAAAGACCCTCTTATGCTTTGGCTAACTGGTGGCCCTGGCTGCTCTTCATTTTCTGGTCTTGCCTTTCAAATAGGTCCACTTGCATTTAAAACTGAGGAGTACAAAGGTAGCCTTCCTAATTTGGTCTTGAGACCACAGTCCTGGACAAAGGTATGTAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGATTCTCTTATGCCAAAAATATCACTGCTCATCGAAGTGACTGGAAATCAGTTCACCATACACATCAATTTCTTAGGAAGTGGCTGATTGATCACTCGGAATTTCTTTCAAATAAATTCTACGTTGGAGCTGATTCATACTCTGGCATTCCTGCCCCCGCTATTGTTCAAGAAATTTCAAATGCAAATGAAAAAGGTCTCCGGCCATGGATAAATCTCCAGGGATATCTACTAGGGAACCCCATAACAACACTAAGAGAGAAAAATTATCAAATCCCATTTGCCCATGGAATGGGACTTATTTCTGATGAACTCTATGAGTCACTGCAGAGAAATTGTAAAGGAGAATATGAAGATATAGATTCCGAATTGTGTTTAATAGATTACCGCTCTTTTGAGGAGTGCCTTTCAGGAATTAATATGTTTAACATTTTGGATAGCTATTGCATAGATGATGATGCACTTAAGGATCATGAAGAAGCTCTGTGGAGGAGATCTCTGACTAAGAAGTTGAAGGCCTCTCTTAGTCCTCATCTCACTGTGCCAGAATTAAGCTGCCAAATTTATGGTTTTTTCCTTGCCACTCAATGGGCCAATGATGAAAGTGTTCGCAGGTCACTGCATATTCAAGAGGGAACTATAGGGAAATGGCAACGTTGTTACACTACTGATTTTGATCATGACATTTCTAGTAGCTTTGAGTTTCATGTAAATCTCAGTGCAAAAGGGTACCGCTCCTTGATATACAGTGGGGATCATGATGTAGTTGTTCCGTTCATTGCAACCCAAGCGTGGATAAGGGATCTAAACTACTCCATTGTGGATGATTGGAGGCCATGGCTTGTTAATGGCCAAGTTGCAGGATATACAAGGACTTACTCGAATCAAATGACATTTGCAACTGTGAAGGGTTCAGGACATACAGCTCCTGAGTACAAGCCTGATGAAGGTTTTGCCATGTTCACTAGGTTCAAGTCGATCCTCGTGCATTCGTGTTCCGCTCTCGCGCGCGATAAAACCAGCGACCTTCCCAACAAAGTCAACAACAACCACAACAACATGATATGTTGA 1305 0.4138 MQVFYYFIKSENNPEKDPLMLWLTGGPGCSSFSGLAFQIGPLAFKTEEYKGSLPNLVLRPQSWTKVCSIIFVDLPLGTGFSYAKNITAHRSDWKSVHHTHQFLRKWLIDHSEFLSNKFYVGADSYSGIPAPAIVQEISNANEKGLRPWINLQGYLLGNPITTLREKNYQIPFAHGMGLISDELYESLQRNCKGEYEDIDSELCLIDYRSFEECLSGINMFNILDSYCIDDDALKDHEEALWRRSLTKKLKASLSPHLTVPELSCQIYGFFLATQWANDESVRRSLHIQEGTIGKWQRCYTTDFDHDISSSFEFHVNLSAKGYRSLIYSGDHDVVVPFIATQAWIRDLNYSIVDDWRPWLVNGQVAGYTRTYSNQMTFATVKGSGHTAPEYKPDEGFAMFTRFKSILVHSCSALARDKTSDLPNKVNNNHNNMIC 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2358g00029 434 PRINTS Carboxypeptidase C serine protease (S10) family signature 59 71 IPR001563 GO:0004185|GO:0006508
Gabi2358g00029 434 PRINTS Carboxypeptidase C serine protease (S10) family signature 106 131 IPR001563 GO:0004185|GO:0006508
Gabi2358g00029 434 PRINTS Carboxypeptidase C serine protease (S10) family signature 375 388 IPR001563 GO:0004185|GO:0006508
Gabi2358g00029 434 PRINTS Carboxypeptidase C serine protease (S10) family signature 72 82 IPR001563 GO:0004185|GO:0006508
Gabi2358g00029 434 Pfam Serine carboxypeptidase 2 402 IPR001563 GO:0004185|GO:0006508
Gabi2358g00029 434 Gene3D alpha/beta hydrolase 1 409 IPR029058 -
Gabi2358g00029 434 FunFam Serine carboxypeptidase-like 19 1 233 - -
Gabi2358g00029 434 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 392 IPR001563 GO:0004185|GO:0006508
Gabi2358g00029 434 FunFam Carboxypeptidase 311 404 - -
Gabi2358g00029 434 FunFam Carboxypeptidase 263 406 - -
Gabi2358g00029 434 SUPERFAMILY alpha/beta-Hydrolases 2 403 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2358g00029 Gabi-Chr2358 276456 297252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2358g00029 271 404 Calmodulin-binding Proteins AT2G22960 62.963 9.12e-57 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2358g00029 K16296 - gmx:100780069 691.034