Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2358g00026 ATGGATATAATTTCAAATTGTTATCGCTATTGTCAGATTCTACTTGCTTTTGCAATTTTCTTACAGATATTTTCTCAGCTTGAAGCCTCTCGCTCAAAGGTGGAACTGCTTCCTGGCTTTCAAGGACCTCTTCCCTTTGAACTCGAAACTGGGTATGTGGGATTAGGGGAAAGAGATGACGACATGCAAGTGTTCTACTACTTTATTAAGTCAGAGAACAACCCTGAGAAAGACCCTCTTATGCTTTGGCTAACTGGTGGCCCTGGCTGCTCTTCATTTTCTGGTCTTGCCTTTCAAATAGGTCCACTTGCATTTAAAACTGAGGAGTACAAAGGTAGCCTTCCTAATTTGGTCTTGAGACCACAGTCCTGGACAAAGGTATGTAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGATTCTCTTATGCCAAAAATATCACTGCTCATCGAAGTGACTGGAAATCAGTTCACCATACACATCAATTTCTTAGGAAGTGGCTGATTGATCACTCGGAATTTCTTTCAAATAAATTCTACGTTGGAGCTGATTCATACTCTGGCATTCCTGCCCCCGCTATTGTTCAAGAAATTTCAAATGCAAATGAAAAAGGTCTCCGGCCATGGATAAATCTCCAGGGATATCTACTAGGGAACCCCATAACAACACTAAGAGAGAAAAATTATCAAATCCCATTTGCCCATGGAATGGGACTTATTTCTGATGAACTCTATGAGTCACTGCAGAGAAATTGTAAAGGAGAATATGAAGATATAGATTCCGAATTGTGTTTAATAGATTACCGCTCTTTTGAGGAGTGCCTTTCAGGAATTAATATGTTTAACATTTTGGATAGCTATTGCATAGATGATGATGCACTTAAGGATCATGAAGAAGCTCTGTGGAGGAGATCTCTGACTAAGAAGTTGAAGGCCTCTCTTAGTCCTCATCTCACTGTGCCAGAATTAAGCTGCCAAATTTATGGTTTTTTCCTTGCCACTCAATGGGCCAATGATGAAAGTGTTCGCAGGTCACTGCATATTCAAGAGGGAACTATAGGGAAATGGCAACGTTGTTACACTACTGATTTTGATCATGACATTTCTAGTAGCTTTGAGTTTCATGTAAATCTCAGTGCAAAAGGGTACCGCTCCTTGATATACAGTGGGGATCATGATGTAGTTGTTCCGTTCATTGCAACCCAAGCGTGGATAAGGGATCTAAACTACTCCATTGTGGATGATTGGAGGCCATGGCTTGTTAATGGCCAAGTTGCAGGGTTATCATTATTGGACTAA 1299 0.4049 MDIISNCYRYCQILLAFAIFLQIFSQLEASRSKVELLPGFQGPLPFELETGYVGLGERDDDMQVFYYFIKSENNPEKDPLMLWLTGGPGCSSFSGLAFQIGPLAFKTEEYKGSLPNLVLRPQSWTKVCSIIFVDLPLGTGFSYAKNITAHRSDWKSVHHTHQFLRKWLIDHSEFLSNKFYVGADSYSGIPAPAIVQEISNANEKGLRPWINLQGYLLGNPITTLREKNYQIPFAHGMGLISDELYESLQRNCKGEYEDIDSELCLIDYRSFEECLSGINMFNILDSYCIDDDALKDHEEALWRRSLTKKLKASLSPHLTVPELSCQIYGFFLATQWANDESVRRSLHIQEGTIGKWQRCYTTDFDHDISSSFEFHVNLSAKGYRSLIYSGDHDVVVPFIATQAWIRDLNYSIVDDWRPWLVNGQVAGLSLLD 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2358g00026 432 Gene3D alpha/beta hydrolase 27 298 IPR029058 -
Gabi2358g00026 432 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Gabi2358g00026 432 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Gabi2358g00026 432 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Gabi2358g00026 432 Gene3D - 328 429 - -
Gabi2358g00026 432 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 423 IPR001563 GO:0004185|GO:0006508
Gabi2358g00026 432 FunFam Serine carboxypeptidase-like 19 27 294 - -
Gabi2358g00026 432 SUPERFAMILY alpha/beta-Hydrolases 37 428 IPR029058 -
Gabi2358g00026 432 Pfam Serine carboxypeptidase 38 427 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2358g00026 Gabi-Chr2358 276454 286995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2358g00026 30 57 Calmodulin-binding Proteins AT2G22960 67.857 1.80e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2358g00026 K16296 - gmx:100780069 688.337