Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2358g00024 ATGGATATAATTTCAAATTGTTATCGCTATTGTCAGATTCTACTTGCTTTTGCAATTTTCTTACAGATATTTTCTCAGCTTGAAGCCTCTCGCTCAAAGGTGGAACTGCTTCCTGGCTTTCAAGGACCTCTTCCCTTTGAACTCGAAACTGGGTATGTGGGATTAGGGGAAAGAGATGACGACATGCAAGTGTTCTACTACTTTATTAAGTCAGAGAACAACCCTGAGAAAGACCCTCTTATGCTTTGGCTAACTGGTGGCCCTGGCTGCTCTTCATTTTCTGGTCTTGCCTTTCAAATAGGTCCACTTGCATTTAAAACTGAGGAGTACAAAGGTAGCCTTCCTAATTTGGTCTTGAGACCACAGTCCTGGACAAAGGTATGTAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGATTCTCTTATGCCAAAAATATCACTGCTCATCGAAGTGACTGGAAATCAGTTCACCATACACATCAATTTCTTAGGAAGTGGCTGATTGATCACTCGGAATTTCTTTCAAATAAATTCTACGTTGGAGCTGATTCATACTCTGGCATTCCTGCCCCCGCTATTGTTCAAGAAATTTCAAATGCAAATGAAAAAGGTCTCCGGCCATGGATAAATCTCCAGGGATATCTACTAGGGAACCCCATAACAACACTAAGAGAGAAAAATTATCAAATCCCATTTGCCCATGGAATGGGACTTATTTCTGATGAACTCTATGAGTCACTGCAGAGAAATTGTAAAGGAGAATATGAAGATATAGATTCCGAATTGTGTTTAATAGATTACCGCTCTTTTGAGGAGTGCCTTTCAGGAATTAATATGTTTAACATTTTGGATAGCTATTGCATAGATGATGATGCACTTAAGGATCATGAAGAAGCTCTGTGGAGGAGATCTCTGACTAAGAAGTTGAAGGCCTCTCTTAGTCCTCATCTCACTGTGCCAGAATTAAGCTGCCAAATTTATGGTTTTTTCCTTGCCACTCAATGGGCCAATGATGAAAGTGTTCGCAGGTCACTGCATATTCAAGAGGGAACTATAGGGAAATGGCAACGTTGTTACACTACTGATTTTGATCATGACATTTCTAGTAGCTTTGAGTTTCATGTAAATCTCAGTGCAAAAGGGTACCGCTCCTTGATATACAGTGGGGATCATGATGTAGTTGTTCCGTTCATTGCAACCCAAGCGTGGATAAGGGATCTAAACTACTCCATTGTGGATGATTGGAGGCCATGGCTTGTTAATGGCCAAGTTGCAGGATATACAAGGACTTACTCGAATCAAATGACATTTGCAACTGTGAAGGGTTCAGGACATACAGCTCCTGAGTACAAGCCTGATGAAGGTTTTGCCATGTTCACTAGGTTCAAGTCGATCCTCGTGCATTCGTGTTCCGCTCTCGCGCGCGATAAAACCAGCGACCTTCCCAACAAAGTCAACAACAACCACAACAACATGATATGTTGA 1488 0.4133 MDIISNCYRYCQILLAFAIFLQIFSQLEASRSKVELLPGFQGPLPFELETGYVGLGERDDDMQVFYYFIKSENNPEKDPLMLWLTGGPGCSSFSGLAFQIGPLAFKTEEYKGSLPNLVLRPQSWTKVCSIIFVDLPLGTGFSYAKNITAHRSDWKSVHHTHQFLRKWLIDHSEFLSNKFYVGADSYSGIPAPAIVQEISNANEKGLRPWINLQGYLLGNPITTLREKNYQIPFAHGMGLISDELYESLQRNCKGEYEDIDSELCLIDYRSFEECLSGINMFNILDSYCIDDDALKDHEEALWRRSLTKKLKASLSPHLTVPELSCQIYGFFLATQWANDESVRRSLHIQEGTIGKWQRCYTTDFDHDISSSFEFHVNLSAKGYRSLIYSGDHDVVVPFIATQAWIRDLNYSIVDDWRPWLVNGQVAGYTRTYSNQMTFATVKGSGHTAPEYKPDEGFAMFTRFKSILVHSCSALARDKTSDLPNKVNNNHNNMIC 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2358g00024 495 FunFam Carboxypeptidase 324 467 - -
Gabi2358g00024 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 453 IPR001563 GO:0004185|GO:0006508
Gabi2358g00024 495 Pfam Serine carboxypeptidase 38 463 IPR001563 GO:0004185|GO:0006508
Gabi2358g00024 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Gabi2358g00024 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Gabi2358g00024 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Gabi2358g00024 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Gabi2358g00024 495 FunFam Carboxypeptidase 372 465 - -
Gabi2358g00024 495 Gene3D alpha/beta hydrolase 33 470 IPR029058 -
Gabi2358g00024 495 FunFam Serine carboxypeptidase-like 11 28 467 - -
Gabi2358g00024 495 SUPERFAMILY alpha/beta-Hydrolases 37 464 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2358g00024 Gabi-Chr2358 276453 297252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2358g00024 30 57 Calmodulin-binding Proteins AT2G22960 67.857 1.73e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2358g00024 K16296 - gmx:100780069 758.829